RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 OR1D4P47884 311 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 UBQLNLQ8IYU4 475 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 GAB3Q8WWW8 586 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 COQ10AQ96MF6 247 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 NIPSNAP1Q9BPW8 284 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 AGAP5A6NIR3 686 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 FAM227AF5H4B4 570 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 RAB38P57729 211 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 PSMA6P60900 246 aaKnown RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ADARB1P78563 741 aaKnown RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 BAIAP2L2Q6UXY1 529 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF595Q8IYB9 648 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF683Q8IZ20 524 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 OR4F15Q8NGB8 312 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 LMF2Q9BU23 707 aaKnown RBP16.44■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF576Q9H609 170 aa16.44■□□□□ 0.22
SCARB2-223ENST00000640640 FUOMA2VDF0 154 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ADPRHP54922 357 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 TLE3Q04726 772 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ILKQ13418 452 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 DUSP7Q16829 419 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 BTBD16Q32M84 506 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 OR6T1Q8NGN1 323 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 TCTN2Q96GX1 697 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 IKZF5Q9H5V7 419 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 KIR3DX1Q9H7L2 352 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 METTL8Q9H825 291 aaKnown RBP16.43■□□□□ 0.22
SCARB2-223ENST00000640640 VDAC3Q9Y277 283 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 DISC1C4P0D8 188 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 H3BML4 177 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 EGFP01133 1207 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ACP2P11117 423 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 CCINQ13939 588 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF750Q32MQ0 723 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 OR2G6Q5TZ20 316 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 SLC35F2Q8IXU6 374 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 C19orf47Q8N9M1 422 aaKnown RBP16.43■□□□□ 0.22
SCARB2-223ENST00000640640 OR5AK2Q8NH90 309 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 NXPE2Q96DL1 559 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ELP4Q96EB1 424 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 POTEKPQ9BYX7 375 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 A4GALTQ9NPC4 353 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 NUDT15Q9NV35 164 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 PSORS1C1Q9UIG5 152 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 TAF1LQ8IZX4 1826 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 LRIT2A6NDA9 550 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 SMAD9O15198 467 aaKnown RBP16.43■□□□□ 0.22
SCARB2-223ENST00000640640 UPK1BO75841 260 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 TSFMP43897 325 aaKnown RBP16.43■□□□□ 0.22
SCARB2-223ENST00000640640 PRKCDQ05655 676 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 MLLT11Q13015 90 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-223ENST00000640640 PDE7AQ13946 482 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 SLCO4A1Q96BD0 722 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 KLHL15Q96M94 604 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 PITX2Q99697 317 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF717Q9BY31 904 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-223ENST00000640640 RLIMQ9NVW2 624 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
SCARB2-223ENST00000640640 POM121BA6NF01 834 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ASTLQ6HA08 431 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 SYNPOQ8N3V7 929 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 DRAXINQ8NBI3 349 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 SLC16A11Q8NCK7 471 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 OR13H1Q8NG92 308 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ADAMTS19Q8TE59 1207 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ELSPBP1Q96BH3 223 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 AMBRA1Q9C0C7 1298 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 VNN3Q9NY84 501 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 SEC16AO15027 2179 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 AQP9O43315 295 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 IL33O95760 270 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ART1P52961 327 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 RPS15P62841 145 aaKnown RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 MAT1AQ00266 395 aaKnown RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 CNIH2Q6PI25 160 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 OLIG3Q7RTU3 272 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ENTHD1Q8IYW4 607 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 CDC14CA4D256 554 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 OR2AT4A6NND4 320 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 SYT5O00445 386 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 CSNK1EP49674 416 aaKnown RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 TPMTP51580 245 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ARPC4P59998 168 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 KDM4DQ6B0I6 523 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 TRMT10AQ8TBZ6 339 aaKnown RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 SGPP1Q9BX95 441 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 C2orf42Q9NWW7 574 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 HEMK1Q9Y5R4 338 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 IFNA21P01568 189 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 CTSLP07711 333 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF43P17038 809 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ELAVL4P26378 380 aaKnown RBP16.42■□□□□ 0.22
SCARB2-223ENST00000640640 PRKXP51817 358 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 PYCR3Q53H96 274 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 PRAMEF8Q5VWM4 474 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 PRAMEF7Q5VXH5 474 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 ZNF584Q8IVC4 421 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 LAS2Q8IYD9 372 aa16.42■□□□□ 0.22
SCARB2-223ENST00000640640 THAP6Q8TBB0 222 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms