RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 MAGEA12P43365 314 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 GABRB2P47870 512 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 IKZF1Q13422 519 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 FAM182AQ5T1J6 154 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SLC23A3Q6PIS1 610 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CCNI2Q6ZMN8 369 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SP7Q8TDD2 431 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 DNAJA3Q96EY1 480 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CDRT15Q96T59 188 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 MCHR1Q99705 422 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CLMPQ9H6B4 373 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 KCMF1Q9P0J7 381 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 USP3Q9Y6I4 520 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 HEATR5BQ9P2D3 2071 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 TIAM2Q8IVF5 1701 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SBF1O95248 1867 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 KANTRA0A1W2PQU2 76 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PDGFBP01127 241 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ZGLP1P0C6A0 271 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 UQCRC2P22695 453 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 F8A1P23610 371 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CTSKP43235 329 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SCTRP47872 440 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 RPL11P62913 178 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 FRMPD2BQ6IN97 320 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CREB3L2Q70SY1 520 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 MOB1BQ7L9L4 216 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 YIPF7Q8N8F6 280 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ADIPOR1Q96A54 375 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PFDN5Q99471 154 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 TMEM79Q9BSE2 394 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SAV1Q9H4B6 383 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 IL26Q9NPH9 171 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PRSS51A0A1B0GVH4 220 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 H0YIG0 161 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CLIC1O00299 241 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 GSTP1P09211 210 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 GDF5P43026 501 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CAPZBP47756 277 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PDK3Q15120 406 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 RPL13AP3Q6NVV1 102 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 AADACL2Q6P093 401 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 HACD2Q6Y1H2 254 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 BEND4Q6ZU67 534 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 AKAP14Q86UN6 197 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CARFQ8N187 725 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF619Q8N2I2 560 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 NOA1Q8NC60 698 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 LRRC15Q8TF66 581 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PDLIM2Q96JY6 352 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 MS4A4EQ96PG1 132 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 INSM2Q96T92 566 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 MROQ9BYG7 248 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 OR10A5Q9H207 317 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 OR10A2Q9H208 303 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ACSS3Q9H6R3 686 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 TAGLN3Q9UI15 199 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 FBXL4Q9UKA2 621 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ICKQ9UPZ9 632 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 C14orf166Q9Y224 244 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CLPXO76031 633 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ABHD16AO95870 558 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 IFNGR1P15260 489 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ERFP50548 548 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 EPHA5P54756 1037 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 HMGCS1Q01581 520 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 FGL1Q08830 312 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF844Q08AG5 666 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 GRB7Q14451 532 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 KCNAB1Q14722 419 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CTC1Q2NKJ3 1217 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 HSD17B12Q53GQ0 312 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 LILRA6Q6PI73 481 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 UBE2Q1Q7Z7E8 422 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ACOT4Q8N9L9 421 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SCGB1C1Q8TD33 95 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 GEMIN6Q8WXD5 167 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 LPGAT1Q92604 370 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 SENP5Q96HI0 755 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PAPOLGQ9BWT3 736 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 LHX9Q9NQ69 397 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 TEX10Q9NXF1 929 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 TBC1D24Q9ULP9 559 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 DDX60LQ5H9U9 1706 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 WDR90Q96KV7 1748 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 FAM25EA8MYX2 175 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ENSAO43768 121 aaKnown RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 NOS1APO75052 506 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-218ENST00000640036 LDB3O75112 727 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PGRP06401 933 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PSMB9P28065 219 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 CDK6Q00534 326 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 GUK1Q16774 197 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 PYDC2Q56P42 97 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 AGAP6Q5VW22 663 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF321PQ8N8H1 164 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 BPIFB6Q8NFQ5 453 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 NSMAFQ92636 917 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 FCGR1BQ92637 280 aa4.7□□□□□ -1.66
SCN1A-218ENST00000640036 KCNN1Q92952 543 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms