RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 OR1N1Q8NGS0 311 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 TMEM239Q8WW34 195 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 TCEAL3Q969E4 200 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 EFHD2Q96C19 240 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 LOXL4Q96JB6 756 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 POLDIP3Q9BY77 421 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 HOXD1Q9GZZ0 328 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 AMBNQ9NP70 447 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 ACOT13Q9NPJ3 140 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 FLRT3Q9NZU0 649 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 A0A1B0GWA3 101 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CHP2O43745 196 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 PRKNO60260 465 aaPredicted RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 INMTO95050 263 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CDK1P06493 297 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 FGF5P12034 268 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 AVPR2P30518 371 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 GRK6P43250 576 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 PCYT1AP49585 367 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 DCDP81605 110 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 TBCEQ15813 527 aaPredicted RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 KLHL26Q53HC5 615 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ACSM5Q6NUN0 579 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC27A4Q6P1M0 643 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CCDC81Q6ZN84 652 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF620Q6ZNG0 422 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 MRGPREQ86SM8 312 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CLDN22Q8N7P3 220 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 WDR36Q8NI36 951 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 RORBQ92753 470 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 C12orf43Q96C57 262 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ARSGQ96EG1 525 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 Q96MT0 163 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 GAL3ST4Q96RP7 486 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 TRIM2Q9C040 744 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 APMAPQ9HDC9 416 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 OCIAD1Q9NX40 245 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 GPR83Q9NYM4 423 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 IL20Q9NYY1 176 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 TVP23BQ9NYZ1 205 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CNOT2Q9NZN8 540 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 MRTO4Q9UKD2 239 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC35A3Q9Y2D2 325 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 PCDHGA5Q9Y5G8 931 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ASCC3Q8N3C0 2202 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 C2orf92A0A1B0GVN3 265 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 OR6C76A6NM76 312 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 EFCAB7A8K855 629 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 IDSB3KWA1 339 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 H3BMQ9 156 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 KHNYNO15037 678 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ENTPD6O75354 484 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CSTAP01040 98 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ACVR2AP27037 513 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 PCSK6P29122 969 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC15A1P46059 708 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 SH3BGRP55822 239 aaPredicted RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 FOXL2P58012 376 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 IL11RAQ14626 422 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 OCLNQ16625 522 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 FNDC7Q5VTL7 733 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 DBX2Q6ZNG2 339 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 SHISA6Q6ZSJ9 500 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 BMP8AQ7Z5Y6 402 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF440Q8IYI8 595 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 BMPERQ8N8U9 685 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF527Q8NB42 609 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 B3GNT7Q8NFL0 401 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 RNF217Q8TC41 542 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 OSTF1Q92882 214 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 FGF11Q92914 225 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 COG8Q96MW5 612 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF426Q9BUY5 554 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 WWTR1Q9GZV5 400 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 NAA50Q9GZZ1 169 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 TMEM5Q9Y2B1 443 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 PCDHGB2Q9Y5G2 931 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 CDH10Q9Y6N8 788 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 MYO15AQ9UKN7 3530 aa11.28□□□□□ -0.6
CACNA1D-228ENST00000638120 EFCAB10A6NFE3 127 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 CDC42EP2O14613 210 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 TO15178 435 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 PRKYO43930 277 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 LDOC1O95751 146 aaPredicted RBP11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 GP1BAP07359 652 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 STSP08842 583 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 PIPP12273 146 aaPredicted RBP11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 PTNP21246 168 aa11.27□□□□□ -0.61
CACNA1D-228ENST00000638120 C21orf33P30042 268 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms