RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PDE7AQ13946 482 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 TMEM44Q2T9K0 475 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 SLC25A35Q3KQZ1 300 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 SPNS3Q6ZMD2 512 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 DHDDSQ86SQ9 333 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 CDH24Q86UP0 819 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 RETREG3Q86VR2 466 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 PLCZ1Q86YW0 608 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 LACC1Q8IV20 430 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 DPP10Q8N608 796 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 BHLHE22Q8NFJ8 381 aaPredicted RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 OR2M3Q8NG83 312 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 OR5M1Q8NGP8 315 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 CLHC1Q8NHS4 586 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 ZPLD1Q8TCW7 415 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 PYDC1Q8WXC3 89 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 PIK3R3Q92569 461 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 GFM2Q969S9 779 aaKnown RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 RSRC1Q96IZ7 334 aaKnown RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 DPY30Q9C005 99 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 METTL7AQ9H8H3 244 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 NTMQ9P121 344 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 PSME2Q9UL46 239 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 CBLCQ9ULV8 474 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 CAMK2AQ9UQM7 478 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 CFL2Q9Y281 166 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 AP3M1Q9Y2T2 418 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 PRORSD1PA6NEY8 169 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 CLCA1A8K7I4 914 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 HSPB2A8KAH6 182 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 FXYD1O00168 92 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 TBX19O60806 448 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 CBR3O75828 277 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 C1QCP02747 245 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 C8BP07358 591 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 ACP2P11117 423 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 NID1P14543 1247 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 ACADSP16219 412 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 ATP6V1C1P21283 382 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 IL12AP29459 219 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 SRD5A2P31213 254 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 EVI2BP34910 448 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 OPRM1P35372 400 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 IST1P53990 364 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 EEFSECP57772 596 aaKnown RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 MS4A2Q01362 244 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 HEPACAMQ14CZ8 416 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 GUSBP1Q15486 140 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 TAF11Q15544 211 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 HSPB2Q16082 182 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 TIGD2Q4W5G0 525 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 GALNT10Q86SR1 603 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 MARCH3Q86UD3 253 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 SPATA24Q86W54 205 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 DHFR2Q86XF0 187 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 LIX1Q8N485 282 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 HIPK4Q8NE63 616 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 OR4C3Q8NH37 302 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 LINC01560Q8TB33 94 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 FAM110BQ8TC76 370 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 DNAJC9Q8WXX5 260 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 RNASE6Q93091 150 aaKnown RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 VPS33AQ96AX1 596 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 OTUB1Q96FW1 271 aaPredicted RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 C16orf58Q96GQ5 468 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 ZNF764Q96H86 408 aaPredicted RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 TEX37Q96LM6 180 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 LRGUKQ96M69 825 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 TSSK3Q96PN8 268 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 DSN1Q9H410 356 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 RUBCNLQ9H714 662 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 CALHM2Q9HA72 323 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 RASSF1Q9NS23 344 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 NMRK1Q9NWW6 199 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 KLRF1Q9NZS2 232 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 MED11Q9P086 117 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 B4GALT7Q9UBV7 327 aa7.08□□□□□ -1.28
PNKP-229ENST00000637897 ZNF629Q9UEG4 869 aaPredicted RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 RPH3AQ9Y2J0 694 aaPredicted RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 MRPS18CQ9Y3D5 142 aaKnown RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 MAP1AP78559 2803 aaPredicted RBP7.08□□□□□ -1.28
PNKP-229ENST00000637897 HEATR5AQ86XA9 2040 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 IGLV3-32A0A0A0MS00 114 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 H3BNX3 289 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 NME4O00746 187 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 CASQ2O14958 399 aaPredicted RBP7.07□□□□□ -1.28
PNKP-229ENST00000637897 OIP5O43482 229 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 AKAP10O43572 662 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 SCO2O43819 266 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 EFNA2O43921 213 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 NKX2-2O95096 273 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 RCBTB2O95199 551 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 KCNH1O95259 989 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 IL33O95760 270 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 IL18BPO95998 194 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 ACTL6AO96019 429 aa7.07□□□□□ -1.28
PNKP-229ENST00000637897 CGAP01215 116 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms