RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TPK1Q9H3S4 243 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 UCK1Q9HA47 277 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 SLC2A4RGQ9NR83 387 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 TMEM74BQ9NUR3 256 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 TOR4AQ9NXH8 423 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 POLHQ9Y253 713 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 CSNK1G3Q9Y6M4 447 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 PRR23D1E9PI22 279 aaPredicted RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 BHLHE40O14503 412 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PLD2O14939 933 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 AQP9O43315 295 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 APOL3O95236 402 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 CBX7O95931 251 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PRR23D2P0DMB1 279 aaPredicted RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 TYRP1P17643 537 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 EIF2B2P49770 351 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 MXD1Q05195 221 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 HNRNPA0Q13151 305 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 XKRXQ6PP77 449 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 SYT13Q7L8C5 426 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 GKN2Q86XP6 184 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 CMIPQ8IY22 773 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 ACBD7Q8N6N7 88 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 ZNF485Q8NCK3 441 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 OR4F15Q8NGB8 312 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 OR6C4Q8NGE1 309 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 OR9A4Q8NGU2 314 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 ASB15Q8WXK1 588 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 RIT1Q92963 219 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 KIAA1143Q96AT1 154 aaPredicted RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 PELOQ9BRX2 385 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 FOLH1BQ9HBA9 442 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 Q9N2J8 555 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 HINT3Q9NQE9 182 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 CMC2Q9NRP2 79 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 PCDHGB2Q9Y5G2 931 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 MTCH2Q9Y6C9 303 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 KNL1Q8NG31 2342 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 CENPVL1A0A0U1RR11 272 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 GXYLT2A0PJZ3 443 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 B4DGG1 531 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 H3BQ06 376 aaPredicted RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 CASKO14936 926 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PRAMEF2O60811 474 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 LYPD3O95274 346 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 IFNGP01579 166 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 SAGP10523 405 aaPredicted RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 PRG2P13727 222 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 SDC2P34741 201 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PPP3R1P63098 170 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 SCN1BQ07699 218 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 CBX3Q13185 183 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 C1orf61Q13536 156 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 FAM53BQ14153 422 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 TRAM1Q15629 374 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PRTGQ2VWP7 1150 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PRPF38BQ5VTL8 546 aaKnown RBP11.23□□□□□ -0.61
CLN8-212ENST00000637083 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 RTL4Q6ZR62 310 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 FRMD1Q8N878 549 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 GDPD1Q8N9F7 314 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 OR4C6Q8NH72 309 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 HPS1Q92902 700 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 OTULINQ96BN8 352 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 FAM210AQ96ND0 272 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 LRFN5Q96NI6 719 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 IFT27Q9BW83 186 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 KCNN2Q9H2S1 579 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 PRTFDC1Q9NRG1 225 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 STARD5Q9NSY2 213 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 FBXO34Q9NWN3 711 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 RPS6KB2Q9UBS0 482 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 KCNE5Q9UJ90 142 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 GRIP1Q9Y3R0 1128 aa11.23□□□□□ -0.61
CLN8-212ENST00000637083 SCN3AQ9NY46 2000 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 A0A0B4J2E0 115 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 A0A1B0GX12 115 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 CHURC1-FNTBB4DL54 471 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 NSA2O95478 260 aaKnown RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 NTN1O95631 604 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 CELA2BP08218 269 aaPredicted RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 ZGLP1P0C6A0 271 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 CD53P19397 219 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 MAKP20794 623 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 PTBP1P26599 531 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLN8-212ENST00000637083 SLC6A6P31641 620 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 FASLGP48023 281 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 IGLV3-21P80748 117 aaPredicted RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 GAS6Q14393 721 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 NIPAL3Q6P499 406 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 PLBD1Q6P4A8 553 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 ZNF322Q6U7Q0 402 aaPredicted RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 FAM131AQ6UXB0 335 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 CCBE1Q6UXH8 406 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms