RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTSD-208ENST00000636843 NRGNQ92686 78 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 SLC47A1Q96FL8 570 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 LRRC46Q96FV0 321 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 AURKBQ96GD4 344 aaPredicted RBP11.53□□□□□ -0.56
CTSD-208ENST00000636843 GAL3ST4Q96RP7 486 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 TMUB1Q9BVT8 246 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 POLDIP3Q9BY77 421 aaKnown RBP11.53□□□□□ -0.56
CTSD-208ENST00000636843 WWTR1Q9GZV5 400 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 LYARQ9NX58 379 aaKnown RBP11.53□□□□□ -0.56
CTSD-208ENST00000636843 DNAJB9Q9UBS3 223 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 ERVK-19Q9WJR5 959 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 WBP11Q9Y2W2 641 aaKnown RBP11.53□□□□□ -0.56
CTSD-208ENST00000636843 NF1P21359 2839 aa11.52□□□□□ -0.56
CTSD-208ENST00000636843 AKAP6Q13023 2319 aa11.52□□□□□ -0.56
CTSD-208ENST00000636843 ANKHD1Q8IWZ3 2542 aaKnown RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 AHRRA9YTQ3 701 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 CPSF4O95639 269 aaKnown RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 LINGO3P0C6S8 592 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 CD99P14209 185 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 DDX5P17844 614 aaKnown RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 GSTM5P46439 218 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 PDE7AQ13946 482 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 SF3B4Q15427 424 aaKnown RBP eCLIP11.52□□□□□ -0.572e-6■■■■□ 20.4
CTSD-208ENST00000636843 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 FBXO30Q8TB52 745 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 C16orf78Q8WTQ4 265 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 RIT1Q92963 219 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 JSRP1Q96MG2 331 aaPredicted RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 DOHHQ9BU89 302 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 MRPS26Q9BYN8 205 aaKnown RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 SLC6A15Q9H2J7 730 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 SAMD4AQ9UPU9 718 aaKnown RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 ASB4Q9Y574 426 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 V9GYQ6 96 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
CTSD-208ENST00000636843 ABCA4P78363 2273 aa11.52□□□□□ -0.57
CTSD-208ENST00000636843 A0A0A6YYD5 115 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 PDLIM1O00151 329 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 DVL2O14641 736 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 TP53I11O14683 189 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 TRIM3O75382 744 aaPredicted RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 EPPINO95925 133 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ABCB1P08183 1280 aaPredicted RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 SLC35E2P0CK97 266 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 NR2F6P10588 404 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ZNF23P17027 643 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 GDF1P27539 372 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 UQCRC1P31930 480 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 TIMP3P35625 211 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ASCL1P50553 236 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 MYBPC1Q00872 1141 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 MERTKQ12866 999 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 VEZF1Q14119 521 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 EBPQ15125 230 aaKnown RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 ADRM1Q16186 407 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 VMACQ2NL98 169 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 FAM71E1Q6IPT2 247 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ENPP6Q6UWR7 440 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 CLECL1Q8IZS7 167 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 NATD1Q8N6N6 113 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 FAM222BQ8WU58 562 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 TP53INP1Q96A56 240 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 DDX31Q9H8H2 851 aaKnown RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 TPT1P8Q9HAU6 139 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 RASSF1Q9NS23 344 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 SMPD3Q9NY59 655 aaPredicted RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 NDUFA13Q9P0J0 144 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 SH3BP4Q9P0V3 963 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
CTSD-208ENST00000636843 RPS6KA6Q9UK32 745 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 PCDHGB4Q9UN71 923 aa11.51□□□□□ -0.57
CTSD-208ENST00000636843 A0A1W2PR48 441 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 C1orf226A1L170 272 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DLGAP1O14490 977 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 EI24O14681 340 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 PRKRAO75569 313 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 PRKD3O94806 890 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 HPRP00739 348 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SERPINA1P01009 418 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 MYF6P23409 242 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 BSGP35613 385 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 C2orf80Q0P641 193 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DUSP8Q13202 625 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 FBXL19-AS1Q494R0 122 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SLC36A3Q495N2 470 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 FLYWCH1Q4VC44 716 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ANKRD26P1Q6NSI1 321 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SEM1Q6ZVN7 128 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TGIF2LYQ8IUE0 185 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 LACC1Q8IV20 430 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms