RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SLC35G5Q96KT7 338 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 OR7D2Q96RA2 312 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 OPN3Q9H1Y3 402 aaPredicted RBP17.04■□□□□ 0.32
CLN6-213ENST00000636212 TIGARQ9NQ88 270 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 EXD2Q9NVH0 621 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 ZNF226Q9NYT6 803 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 PLEKHA6Q9Y2H5 1048 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 POLQO75417 2590 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 GJE1A6NN92 205 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 RNASET2O00584 256 aaKnown RBP17.03■□□□□ 0.32
CLN6-213ENST00000636212 LBPP18428 481 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 ELK4P28324 431 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 CLNS1AP54105 237 aaKnown RBP17.03■□□□□ 0.32
CLN6-213ENST00000636212 ZNF117Q03924 483 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 KEAP1Q14145 624 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 CD226Q15762 336 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 DPY19L1Q2PZI1 675 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 KLHL26Q53HC5 615 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 HBMQ6B0K9 141 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 FAM214BQ7L5A3 538 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 C6orf120Q7Z4R8 191 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 OR2V1Q8NHB1 315 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 NUDT8Q8WV74 236 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 ARL8AQ96BM9 186 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 GMPPAQ96IJ6 420 aaPredicted RBP17.03■□□□□ 0.32
CLN6-213ENST00000636212 MED18Q9BUE0 208 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 LIME1Q9H400 295 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 ZNF395Q9H8N7 513 aaPredicted RBP17.03■□□□□ 0.32
CLN6-213ENST00000636212 GLRX2Q9NS18 164 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 DTNAQ9Y4J8 743 aa17.03■□□□□ 0.32
CLN6-213ENST00000636212 NPIPA5A0A0B4J1W7 369 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 RNF103-CHMP3A0A140T963 221 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 NPIPA7E9PJI5 369 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 TNFSF11O14788 317 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 CXCL13O43927 109 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 ERLIN1O75477 346 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 AGR2O95994 175 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 RAF1P04049 648 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 PABPC4LP0CB38 370 aaKnown RBP17.02■□□□□ 0.32
CLN6-213ENST00000636212 NPIPA8P0DM63 369 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 ADH6P28332 368 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 FAM27E3Q08E93 113 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 ATAD3BQ5T9A4 648 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 PAMR1Q6UXH9 720 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 C16orf62Q7Z3J2 963 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 CLECL1Q8IZS7 167 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 LILRA2Q8N149 483 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 TMCO5AQ8N6Q1 288 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 ANKRD42Q8N9B4 389 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 TOR1AIP2Q8NFQ8 470 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 OR8J2Q8NGG1 315 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 OR5D16Q8NGK9 328 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 OR6K3Q8NGY3 331 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 KLHL15Q96M94 604 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 SORT1Q99523 831 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 NUF2Q9BZD4 464 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 TMEM185BQ9H7F4 350 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 CARD8Q9Y2G2 431 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 TESMINQ9Y4I5 508 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 GPC6Q9Y625 555 aaPredicted RBP17.02■□□□□ 0.32
CLN6-213ENST00000636212 KCNE3Q9Y6H6 103 aa17.02■□□□□ 0.32
CLN6-213ENST00000636212 MED12LQ86YW9 2145 aa17.02■□□□□ 0.31
CLN6-213ENST00000636212 ANKHD1Q8IWZ3 2542 aaKnown RBP17.01■□□□□ 0.31
CLN6-213ENST00000636212 PRSS51A0A1B0GVH4 220 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 C16orf97H3BN30 126 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 ADAMDEC1O15204 470 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 STX11O75558 287 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 AQP8O94778 261 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 CPSF4O95639 269 aaKnown RBP17.01■□□□□ 0.31
CLN6-213ENST00000636212 OPN1LWP04000 364 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 CARD18P57730 90 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 PPP2R2AP63151 447 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 POU4F3Q15319 338 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 TNFAIP8L3Q5GJ75 292 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 STK32CQ86UX6 486 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 ZNF610Q8N9Z0 462 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 RFWD2Q8NHY2 731 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 TESCQ96BS2 214 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 C20orf27Q9GZN8 174 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 HAO1Q9UJM8 370 aa17.01■□□□□ 0.31
CLN6-213ENST00000636212 ZNF264O43296 627 aa17■□□□□ 0.31
CLN6-213ENST00000636212 EIF4E2O60573 245 aaKnown RBP17■□□□□ 0.31
CLN6-213ENST00000636212 CGAP01215 116 aa17■□□□□ 0.31
CLN6-213ENST00000636212 HRGP04196 525 aa17■□□□□ 0.31
CLN6-213ENST00000636212 LINGO3P0C6S8 592 aa17■□□□□ 0.31
CLN6-213ENST00000636212 UBL4AP11441 157 aa17■□□□□ 0.31
CLN6-213ENST00000636212 UQCRC2P22695 453 aa17■□□□□ 0.31
CLN6-213ENST00000636212 PSMA4P25789 261 aaKnown RBP17■□□□□ 0.31
CLN6-213ENST00000636212 SFTPDP35247 375 aa17■□□□□ 0.31
CLN6-213ENST00000636212 UGT2B10P36537 528 aa17■□□□□ 0.31
CLN6-213ENST00000636212 CCR4P51679 360 aa17■□□□□ 0.31
CLN6-213ENST00000636212 RPS26P62854 115 aaKnown RBP17■□□□□ 0.31
CLN6-213ENST00000636212 FOXF1Q12946 379 aa17■□□□□ 0.31
CLN6-213ENST00000636212 CBFBQ13951 182 aa17■□□□□ 0.31
CLN6-213ENST00000636212 GPR68Q15743 365 aa17■□□□□ 0.31
CLN6-213ENST00000636212 EXOC3L2Q2M3D2 409 aa17■□□□□ 0.31
CLN6-213ENST00000636212 ZNF474Q6S9Z5 364 aaPredicted RBP17■□□□□ 0.31
CLN6-213ENST00000636212 FBXO27Q8NI29 283 aa17■□□□□ 0.31
CLN6-213ENST00000636212 OSTF1Q92882 214 aa17■□□□□ 0.31
CLN6-213ENST00000636212 ZBTB9Q96C00 473 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms