RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 RCN3Q96D15 328 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 SFXN2Q96NB2 322 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 SH3GL1Q99961 368 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 TREX2Q9BQ50 279 aaPredicted RBP14.05□□□□□ -0.16
CLN6-211ENST00000635754 TRIM8Q9BZR9 551 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 QRSL1Q9H0R6 528 aaKnown RBP14.05□□□□□ -0.16
CLN6-211ENST00000635754 TP63Q9H3D4 680 aaPredicted RBP14.05□□□□□ -0.16
CLN6-211ENST00000635754 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.05□□□□□ -0.16
CLN6-211ENST00000635754 GID8Q9NWU2 228 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 VDAC3Q9Y277 283 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 SLC35A3Q9Y2D2 325 aa14.05□□□□□ -0.16
CLN6-211ENST00000635754 RPH3AQ9Y2J0 694 aaPredicted RBP14.05□□□□□ -0.16
CLN6-211ENST00000635754 DSPPQ9NZW4 1301 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 A0A087WZY1 265 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 A0A0G2JPF8 293 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 FIGNL2A6NMB9 653 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 HNRNPCL2B2RXH8 293 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 HNRNPCL3B7ZW38 293 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 CCL21O00585 134 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 ZIC3O60481 467 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 EIF4E2O60573 245 aaKnown RBP14.04□□□□□ -0.16
CLN6-211ENST00000635754 HNRNPCL1O60812 293 aaKnown RBP14.04□□□□□ -0.16
CLN6-211ENST00000635754 DCTN3O75935 186 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 DBIP07108 87 aaKnown RBP14.04□□□□□ -0.16
CLN6-211ENST00000635754 HNRNPCL4P0DMR1 293 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 ARAFP10398 606 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 IL7RP16871 459 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 BMP7P18075 431 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 RPS4Y1P22090 263 aaKnown RBP14.04□□□□□ -0.16
CLN6-211ENST00000635754 P2RX1P51575 399 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 CCR4P51679 360 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 PER3P56645 1201 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 CYP51A1Q16850 503 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 NDUFAF6Q330K2 333 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 GLYR1Q49A26 553 aaPredicted RBP14.04□□□□□ -0.16
CLN6-211ENST00000635754 GXYLT1Q4G148 440 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 GKAP1Q5VSY0 366 aaPredicted RBP14.04□□□□□ -0.16
CLN6-211ENST00000635754 PRAMEF8Q5VWM4 474 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 PRAMEF7Q5VXH5 474 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 VASNQ6EMK4 673 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 CBLN3Q6UW01 205 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 ENPP6Q6UWR7 440 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 ARSKQ6UWY0 536 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 HMGN2P46Q86SG4 172 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 DOLPP1Q86YN1 238 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 TREML1Q86YW5 311 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 CMIPQ8IY22 773 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 C10orf111Q8N326 155 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 FAM26EQ8N5C1 309 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 TOR1AIP2Q8NFQ8 470 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 OR5M9Q8NGP3 310 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 BBS10Q8TAM1 723 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 WDR60Q8WVS4 1066 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 ZG16BQ96DA0 208 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 TIMP4Q99727 224 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 PIGQQ9BRB3 760 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 SLC39A3Q9BRY0 314 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 UGT2B28Q9BY64 529 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 TMEM38AQ9H6F2 299 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 PNPLA3Q9NST1 481 aa14.04□□□□□ -0.16
CLN6-211ENST00000635754 FXYD1O00168 92 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 OIP5O43482 229 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 WDR1O75083 606 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 SEMA7AO75326 666 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 CYP7B1O75881 506 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 UBTFL6P0CB48 400 aaPredicted RBP14.03□□□□□ -0.16
CLN6-211ENST00000635754 ESRRAP11474 423 aaPredicted RBP14.03□□□□□ -0.16
CLN6-211ENST00000635754 SLC6A2P23975 617 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 CHMP24386 653 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 GFRA1P56159 465 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 KCNJ10P78508 379 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 CDK6Q00534 326 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 SKP2Q13309 424 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 SELPLGQ14242 412 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 EMC4Q5J8M3 183 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 RPS26P11Q5JNZ5 115 aaPredicted RBP14.03□□□□□ -0.16
CLN6-211ENST00000635754 NANOGP8Q6NSW7 305 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 ZNF585AQ6P3V2 769 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 PM20D2Q8IYS1 436 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 OR8J3Q8NGG0 315 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 OR52P1PQ8NH57 321 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 NFKBIDQ8NI38 313 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 CMTM5Q96DZ9 223 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 LRRC37BQ96QE4 947 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 LAT2Q9GZY6 243 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 KAT8Q9H7Z6 458 aaKnown RBP14.03□□□□□ -0.16
CLN6-211ENST00000635754 NANOGQ9H9S0 305 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 BCL2L10Q9HD36 194 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 MED17Q9NVC6 651 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 ERRFI1Q9UJM3 462 aaPredicted RBP14.03□□□□□ -0.16
CLN6-211ENST00000635754 ICAM5Q9UMF0 924 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 CAMK2AQ9UQM7 478 aa14.03□□□□□ -0.16
CLN6-211ENST00000635754 USP9XQ93008 2570 aaPredicted RBP14.02□□□□□ -0.16
CLN6-211ENST00000635754 OR2M5A3KFT3 312 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 LINC01387J3KSC0 135 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 AIM2O14862 343 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 NID1P14543 1247 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 ZNF17P17021 662 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 ACVR2AP27037 513 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 PGM1P36871 562 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms