RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GK3PQ14409 553 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 KIR2DS5Q14953 304 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 C14orf28Q4W4Y0 310 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 RNF220Q5VTB9 566 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TLDC1Q6P9B6 456 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FAM199XQ6PEV8 388 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ASRGL1Q7L266 308 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FAM217AQ8IXS0 508 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 LRRC18Q8N456 261 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 EID2Q8N6I1 236 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 C2CD4AQ8NCU7 369 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 OR52N2Q8NGI0 321 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 OR6F1Q8NGZ6 308 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 OR4K13Q8NH42 304 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC7A13Q8TCU3 470 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZFP90Q8TF47 636 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CANT1Q8WVQ1 401 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TFAP2BQ92481 460 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 BTF3L4Q96K17 158 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 NDFIP1Q9BT67 221 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 RNF186Q9NXI6 227 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 DNAJB4Q9UDY4 337 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 A0A0D9SEW6 157 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF736B4DX44 427 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PRRG2O14669 202 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IMPA2O14732 288 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GSK3BP49841 420 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SSR4P51571 173 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TAS2R46P59540 309 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 HBG1P69891 147 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 HBG2P69892 147 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IL10RAQ13651 578 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TBC1D28Q2M2D7 210 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 C22orf42Q6IC83 251 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GPR155Q7Z3F1 870 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF679Q8IYX0 411 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 AGBL5Q8NDL9 886 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PLEKHO2Q8TD55 490 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ITFG2Q969R8 447 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 BIRC7Q96CA5 298 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZC3HAV1LQ96H79 300 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF587Q96SQ5 575 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PRRT1Q99946 306 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 NMNAT2Q9BZQ4 307 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PCDHGA1Q9Y5H4 931 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 EVPLQ92817 2033 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF732B4DXR9 585 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 KLRC4O43908 158 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TIMP1P01033 207 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 APOA2P02652 100 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CHRNB1P11230 501 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 KCNE1P15382 129 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 UGT2B7P16662 529 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PTAFRP25105 342 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GKP32189 559 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 BMPR1AP36894 532 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 AGTR2P50052 363 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ATP4BP51164 291 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ARHGAP1Q07960 439 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TBRG1Q3YBR2 411 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC22A6Q4U2R8 563 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF648Q5T619 568 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FAM198BQ6UWH4 519 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 LIPHQ8WWY8 451 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 MYLIPQ8WY64 445 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ADAM19Q9H013 955 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GLTPQ9NZD2 209 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 VSX1Q9NZR4 365 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PPLO60437 1756 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 MSTNO14793 375 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 UGDHO60701 494 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 DCNP07585 359 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 NUDT7P0C024 238 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 UBCP0CG48 685 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 HLA-DOBP13765 273 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FOXN2P32314 431 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IDUAP35475 653 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GABRA4P48169 554 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF585AQ6P3V2 769 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IL34Q6ZMJ4 242 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ESPNLQ6ZVH7 1005 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF761Q86XN6 746 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CISD2Q8N5K1 135 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZUFSPQ96AP4 578 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SORCS2Q96PQ0 1159 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 DCLRE1CQ96SD1 692 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 MBOAT4Q96T53 435 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 EVA1AQ9H8M9 152 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ISYNA1Q9NPH2 558 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 RPS10P5Q9NQ39 176 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 KCNIP2Q9NS61 270 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GDE1Q9NZC3 331 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 MED16Q9Y2X0 877 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF587BE7ETH6 402 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 LGALS8O00214 317 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IQCF3P0C7M6 154 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 OR8U8P0C7N1 319 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IL7P13232 177 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SDHBP21912 280 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 MAP2K3P46734 347 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms