RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GABARAPL3Q9BY60 117 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 NDEL1Q9GZM8 345 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 GALNT8Q9NY28 637 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 MGAT4BQ9UQ53 548 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 MRPS18BQ9Y676 258 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 HCRTR2O43614 444 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 CXCR4P61073 352 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 TMCO6Q96DC7 493 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 CCNL2Q96S94 520 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 GPR87Q9BY21 358 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 EXOSC4Q9NPD3 245 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 ERVK-18Q9QC07 812 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 FBXL4Q9UKA2 621 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 ENPP4Q9Y6X5 453 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 PMF1-BGLAPU3KQ54 211 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 NPIPA5A0A0B4J1W7 369 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 NPIPA7E9PJI5 369 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 GNB5O14775 395 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 STX11O75558 287 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 NPIPA8P0DM63 369 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 ATP1A4Q13733 1029 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 SSPNQ14714 243 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 PLEKHM3Q6ZWE6 761 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 PIP4P1Q86T03 277 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 FAM98AQ8NCA5 519 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 B3GNT7Q8NFL0 401 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 TM9SF4Q92544 642 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 ABTB1Q969K4 478 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 OTULINQ96BN8 352 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 ZNF578Q96N58 590 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 HMG20AQ9NP66 347 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 NDUFAF4Q9P032 175 aa11.54□□□□□ -0.56
SYNGAP1-207ENST00000628646 EFCAB10A6NFE3 127 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 C21orf140B9A014 251 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 ARAFP10398 606 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 LIMS1P48059 325 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 MAD2L1BPQ15013 274 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 NPTX1Q15818 432 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 ZNF829Q3KNS6 432 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 EIPR1Q53HC9 387 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 HORMAD2Q8N7B1 307 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 ALPK1Q96QP1 1244 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 ITPAQ9BY32 194 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 TMEM38AQ9H6F2 299 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 SDHAF3Q9NRP4 125 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 ERGIC3Q9Y282 383 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 G3V3Y1 287 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 GABARAPO95166 117 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 MYL12AP19105 171 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 GSTM3P21266 225 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 MMP11P24347 488 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 TBC1D25Q3MII6 688 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 COLEC12Q5KU26 742 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 OPN5Q6U736 354 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 QSOX2Q6ZRP7 698 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 TEX47Q8TBZ9 253 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 LDAHQ9H6V9 325 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 TMEM27Q9HBJ8 222 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 IL17BQ9UHF5 180 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 PCDHGA6Q9Y5G7 932 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 SERPINI2O75830 405 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 FMO3P31513 532 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 NPRL3Q12980 569 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 DGCR6Q14129 220 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 CCDC80Q76M96 950 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 AMER2Q8N7J2 671 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 KBTBD8Q8NFY9 601 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 OR7G2Q8NG99 324 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 APOBEC4Q8WW27 367 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 TMEM19Q96HH6 336 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 IGF2RP11717 2491 aa11.53□□□□□ -0.56
SYNGAP1-207ENST00000628646 C9orf172C9J069 976 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 OXSR1O95747 527 aaPredicted RBP11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 CSTAP01040 98 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 MOGQ16653 247 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 CYP27C1Q4G0S4 372 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 ENTHD1Q8IYW4 607 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 S100ZQ8WXG8 99 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 ZNF300Q96RE9 604 aaPredicted RBP11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 UTP23Q9BRU9 249 aaKnown RBP11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 COPS4Q9BT78 406 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 POLR2J3Q9H1A7 115 aaKnown RBP11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 FOLH1BQ9HBA9 442 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 PPP4R1LQ9P1A2 415 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 CBLCQ9ULV8 474 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 LYVE1Q9Y5Y7 322 aa11.52□□□□□ -0.56
SYNGAP1-207ENST00000628646 ACACBO00763 2458 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 C4orf51C9J302 202 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 TPST2O60704 377 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 SSR4P51571 173 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 PCBP3P57721 371 aaKnown RBP11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 PRAMEF20Q5VT98 475 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 NDUFAF7Q7L592 441 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 SLC16A11Q8NCK7 471 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 TAMM41Q96BW9 452 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 OR7D2Q96RA2 312 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 UCK2Q9BZX2 261 aa11.52□□□□□ -0.57
SYNGAP1-207ENST00000628646 CHRNA10Q9GZZ6 450 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms