RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 HHATLQ9HCP6 504 aa6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 EXOSC3Q9NQT5 275 aaKnown RBP6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 FAM118AQ9NWS6 357 aa6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 DNAJB12Q9NXW2 375 aaKnown RBP6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 FOXJ2Q9P0K8 574 aa6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF223Q9UK11 482 aaPredicted RBP6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 TCFL5Q9UL49 500 aa6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 NPFFR2Q9Y5X5 522 aa6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 HS3ST3B1Q9Y662 390 aa6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 COL27A1Q8IZC6 1860 aaPredicted RBP6.94□□□□□ -1.3
PTP4A1-206ENST00000627002 ASXL3Q9C0F0 2248 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 NSG1A0A0A6YYJ2 146 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 LOC100130705A0A1B0GUX0 176 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 CDC14CA4D256 554 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 MAGEA13PA6NCF6 341 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 GTPBP1O00178 669 aaKnown RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SOCS6O14544 535 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 BCKDKO14874 412 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SLC16A6O15403 523 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 PRKNO60260 465 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 OR10H3O60404 316 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 RAD1O60671 282 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 TPST2O60704 377 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 PPM1BO75688 479 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 TNFAIP8O95379 198 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 COX6A1P12074 109 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 GSTM3P21266 225 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 CBLP22681 906 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 RBMS1P29558 406 aaKnown RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SLC6A8P48029 635 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 CLK3P49761 638 aaKnown RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 UGT2B15P54855 530 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 TPD52P55327 224 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 ESRRGP62508 458 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 HOXC5Q00444 222 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 IL1RL1Q01638 556 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 COX10Q12887 443 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 NPRL3Q12980 569 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 DNASE1L3Q13609 305 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 KEAP1Q14145 624 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 OR1Q1Q15612 314 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 FNDC7Q5VTL7 733 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF770Q6IQ21 691 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 PODNL1Q6PEZ8 512 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 KIRREL2Q6UWL6 708 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 CD300LDQ6UXZ3 194 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF730Q6ZMV8 503 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 USP51Q70EK9 711 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 RRM2BQ7LG56 351 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 GDF7Q7Z4P5 450 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 MISPQ8IVT2 679 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 PRR22Q8IZ63 422 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 RNF113BQ8IZP6 322 aaKnown RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 C8orf59Q8N0T1 100 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 PARP8Q8N3A8 854 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 LSMEM1Q8N8F7 131 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 AQP11Q8NBQ7 271 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SETD9Q8NE22 299 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 FAM71CQ8NEG0 241 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 OR11G2Q8NGC1 345 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 OR9Q2Q8NGE9 314 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SLC7A13Q8TCU3 470 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 ELP5Q8TE02 316 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 ADAMTS16Q8TE57 1224 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 ACOT11Q8WXI4 607 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 CNOT9Q92600 299 aaKnown RBP6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 TMCO6Q96DC7 493 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 IMMP1LQ96LU5 166 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 HS6ST2Q96MM7 605 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 LMF1Q96S06 567 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 GABARAPL3Q9BY60 117 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 DEFB126Q9BYW3 111 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 TBL1XR1Q9BZK7 514 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 UCK2Q9BZX2 261 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 RIBC2Q9H4K1 309 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 MMP25Q9NPA2 562 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 PNPLA3Q9NST1 481 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 MAN2C1Q9NTJ4 1040 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SELENONQ9NZV5 590 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 MYOTQ9UBF9 498 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 RPS6KB2Q9UBS0 482 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 SLC7A7Q9UM01 511 aa6.93□□□□□ -1.3
PTP4A1-206ENST00000627002 NCOR2Q9Y618 2525 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 UNC13CQ8NB66 2214 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 A0A087WUU8 490 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 TMEM200CA6NKL6 621 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ALG1L2C9J202 215 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 WWP2O00308 870 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 TM4SF5O14894 197 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF264O43296 627 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 NDUFB5O43674 189 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 CHP2O43745 196 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 EIF4E2O60573 245 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 MITFO75030 526 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ICOSLGO75144 302 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 NADKO95544 446 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 HPP00738 406 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms