RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 PHOSPHO1Q8TCT1 267 aa16.9■□□□□ 0.3
SMN1-211ENST00000625245 GTPBP3Q969Y2 492 aaKnown RBP16.9■□□□□ 0.3
SMN1-211ENST00000625245 TRMT61AQ96FX7 289 aaKnown RBP16.9■□□□□ 0.3
SMN1-211ENST00000625245 CCT7Q99832 543 aa16.9■□□□□ 0.3
SMN1-211ENST00000625245 C12orf65Q9H3J6 166 aaKnown RBP16.9■□□□□ 0.3
SMN1-211ENST00000625245 NTMQ9P121 344 aa16.9■□□□□ 0.3
SMN1-211ENST00000625245 RNF115Q9Y4L5 304 aa16.9■□□□□ 0.3
SMN1-211ENST00000625245 PLIN3O60664 434 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 CRLF1O75462 422 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 CD3EP07766 207 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 LINGO3P0C6S8 592 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 FAM153BP0C7A2 387 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 CPA3P15088 417 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 LCN1P31025 176 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 EIF1P41567 113 aaKnown RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 CCT5P48643 541 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 RPL38P63173 70 aaKnown RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 POU6F2P78424 691 aaPredicted RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 FOXF1Q12946 379 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 ZNF239Q16600 458 aaKnown RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 FAM153CQ494X1 144 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 ZCCHC12Q6PEW1 402 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 LRIG3Q6UXM1 1119 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 Q6ZSR9 355 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 CXXC5Q7LFL8 322 aaKnown RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 OR2T11Q8NH01 316 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 NEUROG1Q92886 237 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 FBXW5Q969U6 566 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 ZNF764Q96H86 408 aaPredicted RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 BTBD2Q9BX70 525 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 SRXN1Q9BYN0 137 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 ESRP2Q9H6T0 727 aaKnown RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 NGBQ9NPG2 151 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 ACSS1Q9NUB1 689 aaPredicted RBP16.89■□□□□ 0.29
SMN1-211ENST00000625245 OXSMQ9NWU1 459 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 GIN1Q9NXP7 522 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 ABCA1O95477 2261 aa16.89■□□□□ 0.29
SMN1-211ENST00000625245 CADP27708 2225 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 NPIPA5A0A0B4J1W7 369 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 A0A1W2PQD3 144 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 NPIPA7E9PJI5 369 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 NPIPB8E9PQR5 432 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 AZIN1O14977 448 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 TBX19O60806 448 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 GCM2O75603 506 aaPredicted RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 LINC00032P0C843 101 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 NPIPA8P0DM63 369 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 ATP6V1C1P21283 382 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 FRKP42685 505 aaPredicted RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 RNPS1Q15287 305 aaKnown RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 TAB1Q15750 504 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 TMEM176BQ3YBM2 270 aaPredicted RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 GALNTL6Q49A17 601 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 RFTN2Q52LD8 501 aaPredicted RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 NCMAPQ5T1S8 102 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 SFRP5Q5T4F7 317 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 GABRG1Q8N1C3 465 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 LILRB1Q8NHL6 650 aaPredicted RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 FBXO27Q8NI29 283 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 RNF128Q8TEB7 428 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 CDS1Q92903 461 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 CPNE4Q96A23 557 aaPredicted RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 FCRL1Q96LA6 429 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 ZCCHC3Q9NUD5 404 aaKnown RBP16.88■□□□□ 0.29
SMN1-211ENST00000625245 KLHL13Q9P2N7 655 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 SNX8Q9Y5X2 465 aa16.88■□□□□ 0.29
SMN1-211ENST00000625245 CR1P17927 2039 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 GJE1A6NN92 205 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 ZNF195O14628 629 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 OIP5O43482 229 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 EFNA2O43921 213 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 PRKD3O94806 890 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 HSPA4LO95757 839 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 ADAP00813 363 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 SOD3P08294 240 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 CRHR1P34998 444 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 IDUAP35475 653 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 CDKN1AP38936 164 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 ZNF117Q03924 483 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 KRTAP1-1Q07627 177 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 DMTNQ08495 405 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 PDE7AQ13946 482 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 LASP1Q14847 261 aaKnown RBP16.87■□□□□ 0.29
SMN1-211ENST00000625245 LIPMQ5VYY2 423 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 ADAM5Q6NVV9 412 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 TFAP2EQ6VUC0 442 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 FCRLAQ7L513 359 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 CNPY4Q8N129 248 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 SMAP2Q8WU79 429 aaPredicted RBP16.87■□□□□ 0.29
SMN1-211ENST00000625245 HSD17B8Q92506 261 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 KISS1RQ969F8 398 aaPredicted RBP16.87■□□□□ 0.29
SMN1-211ENST00000625245 FAM120BQ96EK7 910 aaKnown RBP16.87■□□□□ 0.29
SMN1-211ENST00000625245 REPIN1Q9BWE0 567 aaKnown RBP16.87■□□□□ 0.29
SMN1-211ENST00000625245 REG4Q9BYZ8 158 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 TUBB1Q9H4B7 451 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 CARD8Q9Y2G2 431 aa16.87■□□□□ 0.29
SMN1-211ENST00000625245 COL6A5A8TX70 2615 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 A0A1W2PP18 115 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 SMIM23A6NLE4 172 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 OVOL3O00110 214 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms