RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OR51Q1Q8NH59 317 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 MAFAQ8NHW3 353 aaPredicted RBP18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 SPRTNQ9H040 489 aaPredicted RBP18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 OR52D1Q9H346 318 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 C20orf141Q9NUB4 165 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 IL20RAQ9UHF4 553 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 CFL2Q9Y281 166 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM5Q9Y2B1 443 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 CARD8Q9Y2G2 431 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 EXOSC1Q9Y3B2 195 aaKnown RBP18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 SPAG17Q6Q759 2223 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 OR2W5A6NFC9 320 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ZGLP1P0C6A0 271 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 IFI30P13284 250 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 CRYBB2P43320 205 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 CSNK1EP49674 416 aaKnown RBP18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 WNT4P56705 351 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 FUT7Q11130 342 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 GRM7Q14831 915 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 AMZ1Q400G9 498 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 NKAIN2Q5VXU1 208 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 TMPRSS11FQ6ZWK6 438 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 PHC2Q8IXK0 858 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 METTL27Q8N6F8 245 aaPredicted RBP18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF614Q8N883 585 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 RCBTB1Q8NDN9 531 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 OR9Q1Q8NGQ5 310 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 SPACA7Q96KW9 195 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 HS6ST2Q96MM7 605 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 C6orf62Q9GZU0 229 aaPredicted RBP18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ATP13A2Q9NQ11 1180 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 DNAJB12Q9NXW2 375 aaKnown RBP18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 STUB1Q9UNE7 303 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 RNF215Q9Y6U7 377 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 A0A0B4J2E0 115 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 A0A1B0GX12 115 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 STK25O00506 426 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ATP6V1G1O75348 118 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 APOL3O95236 402 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 CD1CP29017 333 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 GALNSP34059 522 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 FXYD6P3P58550 94 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ATP1A4Q13733 1029 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF141Q15928 474 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 NXNL2Q5VZ03 156 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 HSDL2Q6YN16 418 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 CDK20Q8IZL9 346 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 FANK1Q8TC84 345 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 CLDN23Q96B33 292 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 G6PC3Q9BUM1 346 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 CNPPD1Q9BV87 410 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 Q9N2J8 555 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 LRIT1Q9P2V4 623 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 ERVK-19Q9WJR5 959 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 MED31Q9Y3C7 131 aa18.22■□□□□ 0.51
PCDHB11-202ENST00000624887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 NPIPB9F8W1W9 429 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 CHP2O43745 196 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 CT45A8P0DMV1 189 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 CT45A9P0DMV2 189 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 CPEP16870 476 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 TBXA2RP21731 343 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 BCKDHBP21953 392 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 SOX6P35712 828 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 ACAA2P42765 397 aaKnown RBP18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 PPP5CP53041 499 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 CTBP2P56545 445 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 SERTAD2Q14140 314 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 ZSWIM7Q19AV6 140 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 CT45A2Q5DJT8 189 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 TUBA3EQ6PEY2 450 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 C16orf52Q8NHV5 167 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 DNASE2BQ8WZ79 361 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 SLC35B4Q969S0 331 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 BPIFA2Q96DR5 249 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 PELOQ9BRX2 385 aaKnown RBP18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 OR10A5Q9H207 317 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 ISYNA1Q9NPH2 558 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 FLRT3Q9NZU0 649 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 KLHL3Q9UH77 587 aa18.21■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM221A6NGB7 291 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 SLC2A10O95528 541 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 OCM2P0CE71 109 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 OCMP0CE72 109 aaPredicted RBP18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 CD40LGP29965 261 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 HTR1FP30939 366 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 PGDP52209 483 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 IFITM3Q01628 133 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 BIKQ13323 160 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 FGFBP1Q14512 234 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 LIPKQ5VXJ0 399 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 RPL13AP3Q6NVV1 102 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 ZNF615Q8N8J6 731 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 OR52L1Q8NGH7 329 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 TRIM2Q9C040 744 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 EXOSC4Q9NPD3 245 aaKnown RBP18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 CBLCQ9ULV8 474 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 CSNK1G3Q9Y6M4 447 aa18.21■□□□□ 0.5
PCDHB11-202ENST00000624887 A0A1B0GWA3 101 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms