RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 RDH12Q96NR8 316 aa13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 RASL10BQ96S79 203 aa13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 PSD2Q9BQI7 771 aa13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 ZNF559Q9BR84 538 aa13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 VCX3AQ9NNX9 186 aa13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 PDP1Q9P0J1 537 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 MRPS18BQ9Y676 258 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-212ENST00000622493 FADS1O60427 444 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ZNF354AO60765 605 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ITGA10O75578 1167 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 FBXO45P0C2W1 286 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 UBTFL6P0CB48 400 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 EVI2BP34910 448 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 CLK3P49761 638 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 PLAURQ03405 335 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 DCST1Q5T197 706 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 H3F3CQ6NXT2 135 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 OPN5Q6U736 354 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 PLEKHM3Q6ZWE6 761 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 RPS19BP1Q86WX3 136 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 MISPQ8IVT2 679 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 HS3ST5Q8IZT8 346 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 LINC00471Q8N535 108 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 LSMEM1Q8N8F7 131 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 PHOSPHO1Q8TCT1 267 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 CNOT9Q92600 299 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ALPK1Q96QP1 1244 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 TBL1XR1Q9BZK7 514 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 RHCGQ9UBD6 479 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 RAB26Q9ULW5 256 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 MAGED1Q9Y5V3 778 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 GTPBP1O00178 669 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ZNF264O43296 627 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 BCAS1O75363 584 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 CYP7B1O75881 506 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 CELA2AP08217 269 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 GKN3PP0CG01 181 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 UBL4AP11441 157 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ANXA8P13928 327 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ELAVL4P26378 380 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 EPS8Q12929 822 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 NTRK2Q16620 822 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 EXOC3L2Q2M3D2 409 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 RFX4Q33E94 735 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 JMJD6Q6NYC1 403 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 ZNF613Q6PF04 617 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 APOOLQ6UXV4 268 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 HGDQ93099 445 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 SPACA9Q96E40 222 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 OSBPL11Q9BXB4 747 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 TRIM2Q9C040 744 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 TMEM27Q9HBJ8 222 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 HHATLQ9HCP6 504 aa13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 SMPD3Q9NY59 655 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-212ENST00000622493 C7orf72A4D263 438 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 CPSF4LA6NMK7 179 aaKnown RBP13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 FAAHO00519 579 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 NDUFB5O43674 189 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 EIF4E2O60573 245 aaKnown RBP13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 CCNB2O95067 398 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 ITGAMP11215 1152 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 PRG2P13727 222 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 UQCRBP14927 111 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 LIFP15018 202 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 PRKACGP22612 351 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 ACAA2P42765 397 aaKnown RBP13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 FBXW4P57775 412 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 MLF1P58340 268 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 HOXC5Q00444 222 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 TRAM2Q15035 370 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 TGIF1Q15583 401 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 CD226Q15762 336 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 FGD3Q5JSP0 725 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 TSPYL5Q86VY4 417 aaPredicted RBP13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 OR10G2Q8NGC3 310 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 SLC7A13Q8TCU3 470 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 RNF138Q8WVD3 245 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 SLC38A4Q969I6 547 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 FUZQ9BT04 418 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 Q9H521 79 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 EXPH5Q8NEV8 1989 aa13.04□□□□□ -0.32
CLTCL1-212ENST00000622493 TP53I11O14683 189 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 ANGPTL1O95841 491 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 LYNP07948 512 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 HTR2AP28223 471 aa13.03□□□□□ -0.32
CLTCL1-212ENST00000622493 SLC6A8P48029 635 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms