RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SLC22A5O76082 557 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 TCRBP04435 133 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 ANKRD34CP0C6C1 535 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 MAKP20794 623 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 PRDX1Q06830 199 aaKnown RBP14.68□□□□□ -0.06
NPHP4-211ENST00000622020 BHLHB9Q6PI77 547 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 THSD4Q6ZMP0 1018 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 WDR88Q6ZMY6 472 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 LRRC28Q86X40 367 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-211ENST00000622020 ZNF687Q8N1G0 1237 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 LINC00615Q96LM1 132 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-211ENST00000622020 CAMK1GQ96NX5 476 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 OR51J1Q9H342 316 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 MRPS30Q9NP92 439 aaKnown RBP14.68□□□□□ -0.06
NPHP4-211ENST00000622020 FBXO34Q9NWN3 711 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 NLGN3Q9NZ94 848 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 POLHQ9Y253 713 aa14.68□□□□□ -0.06
NPHP4-211ENST00000622020 REV3LO60673 3130 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 DNAJB6O75190 326 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 DRD2P14416 443 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 ATP5A1P25705 553 aaKnown RBP14.67□□□□□ -0.06
NPHP4-211ENST00000622020 MPIP34949 423 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 CDK3Q00526 305 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 CDONQ4KMG0 1287 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 PXDC1Q5TGL8 231 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 METRNLQ641Q3 311 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 CDC73Q6P1J9 531 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-211ENST00000622020 GRHL3Q8TE85 626 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 FOLH1BQ9HBA9 442 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 BRD7Q9NPI1 651 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 PRDM7Q9NQW5 492 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 GLTPQ9NZD2 209 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 PSMD9O00233 223 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 TRIM3O75382 744 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-211ENST00000622020 IGHA1P01876 353 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 CISD3P0C7P0 127 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 FPR3P25089 353 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 THBS2P35442 1172 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 MAGEB1P43366 347 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 FXYD6P3P58550 94 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 PUS10Q3MIT2 529 aaKnown RBP14.67□□□□□ -0.06
NPHP4-211ENST00000622020 CNKSR3Q6P9H4 555 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 MRGPREQ86SM8 312 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 OAFQ86UD1 273 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 SERPINA12Q8IW75 414 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 OR13C2Q8NGS9 318 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 OR5J2Q8NH18 312 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 OR52N1Q8NH53 320 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 ABHD4Q8TB40 342 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 ZCCHC10Q8TBK6 192 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 FANK1Q8TC84 345 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 LRIG1Q96JA1 1093 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.67□□□□□ -0.065e-7■■■■■ 29.4
NPHP4-211ENST00000622020 AK6Q9Y3D8 172 aaKnown RBP14.67□□□□□ -0.06
NPHP4-211ENST00000622020 WDR45Q9Y484 360 aa14.67□□□□□ -0.06
NPHP4-211ENST00000622020 ZNF860A6NHJ4 632 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 EMC8O43402 210 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 VEGFDO43915 354 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 CEBPBP17676 345 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 BMP7P18075 431 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ITGB8P26012 769 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 P2RY2P41231 377 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 STAT5AP42229 794 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 POU6F2P78424 691 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 SIM1P81133 766 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 CRYZQ08257 329 aaKnown RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 GNA13Q14344 377 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 TP53I3Q53FA7 332 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 PRPF38BQ5VTL8 546 aaKnown RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ABHD17CQ6PCB6 329 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 SSX6Q7RTT6 188 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 SPRED2Q7Z698 418 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ADGRD2Q7Z7M1 963 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 OR7G2Q8NG99 324 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 LRRC20Q8TCA0 184 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 PTP4A1Q93096 173 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 SPRTNQ9H040 489 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 DPAGT1Q9H3H5 408 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 PIGUQ9H490 435 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 AUNIPQ9H7T9 357 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ADAP2Q9NPF8 381 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 TRIM36Q9NQ86 728 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ASB6Q9NWX5 421 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ZNF224Q9NZL3 707 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 PPIEQ9UNP9 301 aaKnown RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 EXOGQ9Y2C4 368 aaKnown RBP14.66□□□□□ -0.06
NPHP4-211ENST00000622020 H3BSH0 61 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 TEX46H3BTG2 121 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 TBX19O60806 448 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 PTHLHP12272 177 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 EPCAMP16422 314 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 MAPK14Q16539 360 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ST3GAL2Q16842 350 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 SLC36A2Q495M3 483 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ACSM3Q53FZ2 586 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 MBOAT2Q6ZWT7 520 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 ARHGDIGQ99819 225 aa14.66□□□□□ -0.06
NPHP4-211ENST00000622020 GHITMQ9H3K2 345 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms