RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 COQ5Q5HYK3 327 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 ENPP6Q6UWR7 440 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 PM20D2Q8IYS1 436 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 ULK2Q8IYT8 1036 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 PHF10Q8WUB8 498 aaKnown RBP16.56■□□□□ 0.24
LITAF-220ENST00000620789 CGREF1Q99674 301 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 PIGQQ9BRB3 760 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 CPPED1Q9BRF8 314 aaPredicted RBP16.56■□□□□ 0.24
LITAF-220ENST00000620789 QRSL1Q9H0R6 528 aaKnown RBP16.56■□□□□ 0.24
LITAF-220ENST00000620789 IKZF5Q9H5V7 419 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 MTHFD2LQ9H903 347 aaPredicted RBP16.56■□□□□ 0.24
LITAF-220ENST00000620789 A4GALTQ9NPC4 353 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 FAM53CQ9NYF3 392 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 ICAM5Q9UMF0 924 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 VDAC3Q9Y277 283 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 PCNX3Q9H6A9 2034 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 DSPPQ9NZW4 1301 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 OR2M5A3KFT3 312 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 AGAP5A6NIR3 686 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 BBIP1A8MTZ0 92 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 FAM47E-STBD1D6RA91 191 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 ZG16O60844 167 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 CSTAP01040 98 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 HOXD4P09016 255 aaPredicted RBP16.55■□□□□ 0.24
LITAF-220ENST00000620789 CPN1P15169 458 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 GPX2P18283 190 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 LHX2P50458 406 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 ZNF41P51814 821 aaPredicted RBP16.55■□□□□ 0.24
LITAF-220ENST00000620789 ADORA2A-AS1P86434 159 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 SKP2Q13309 424 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 TMEM44Q2T9K0 475 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 TRMT5Q32P41 509 aaKnown RBP16.55■□□□□ 0.24
LITAF-220ENST00000620789 NCCRP1Q6ZVX7 275 aaPredicted RBP16.55■□□□□ 0.24
LITAF-220ENST00000620789 EIF3MQ7L2H7 374 aaKnown RBP16.55■□□□□ 0.24
LITAF-220ENST00000620789 HMGN2P46Q86SG4 172 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 SNX32Q86XE0 403 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 C10orf111Q8N326 155 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 RPRMLQ8N4K4 120 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 TMCO5AQ8N6Q1 288 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 ZBTB8AQ96BR9 441 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 WDYHV1Q96HA8 205 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 TMEM19Q96HH6 336 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 ANKRD27Q96NW4 1050 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 KLHDC3Q9BQ90 382 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 MED17Q9NVC6 651 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 ALKBH4Q9NXW9 302 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 CAMK2AQ9UQM7 478 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 SLC35A3Q9Y2D2 325 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 FAM215AQ9Y5M1 114 aa16.55■□□□□ 0.24
LITAF-220ENST00000620789 LOC100653049A0A140TA62 436 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 C7orf72A4D263 438 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 AHRRA9YTQ3 701 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 LINC01387J3KSC0 135 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 KRT34O76011 436 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 ZNF17P17021 662 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 RPS4Y1P22090 263 aaKnown RBP16.54■□□□□ 0.24
LITAF-220ENST00000620789 PTGER4P35408 488 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 STARP49675 285 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 CYLC2Q14093 348 aaPredicted RBP16.54■□□□□ 0.24
LITAF-220ENST00000620789 PLPPR5Q32ZL2 321 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 MMEL1Q495T6 779 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 GCNT6Q5T4J0 391 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 C1orf185Q5T7R7 199 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 REP15Q6BDI9 236 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 RTL6Q6ICC9 239 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 TMEM211Q6ICI0 200 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 RPTNQ6XPR3 784 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 B3GNT6Q6ZMB0 384 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 MTDHQ86UE4 582 aaKnown RBP16.54■□□□□ 0.24
LITAF-220ENST00000620789 MARVELD2Q8N4S9 558 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 FAM71CQ8NEG0 241 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 TOR1AIP2Q8NFQ8 470 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 OR5M1Q8NGP8 315 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 OR5W2Q8NH69 310 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 MAL2Q969L2 176 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 TREX2Q9BQ50 279 aaPredicted RBP16.54■□□□□ 0.24
LITAF-220ENST00000620789 LAT2Q9GZY6 243 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.54■□□□□ 0.24
LITAF-220ENST00000620789 DIDO1Q9BTC0 2240 aaKnown RBP16.54■□□□□ 0.24
LITAF-220ENST00000620789 MYO7BQ6PIF6 2116 aa16.54■□□□□ 0.24
LITAF-220ENST00000620789 USP9YO00507 2555 aaPredicted RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 MED12Q93074 2177 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 A0A0G2JPF8 293 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 HNRNPCL2B2RXH8 293 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 HNRNPCL3B7ZW38 293 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 SHISA8B8ZZ34 492 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 MRASO14807 208 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 HNRNPCL1O60812 293 aaKnown RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 NUDT14O95848 222 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 DBIP07108 87 aaKnown RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 LINGO3P0C6S8 592 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 UBTFL6P0CB48 400 aaPredicted RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 HNRNPCL4P0DMR1 293 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 ARAFP10398 606 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 ZNF708P17019 499 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 PGM1P36871 562 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 CLDN18P56856 261 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 KCNJ10P78508 379 aa16.53■□□□□ 0.24
LITAF-220ENST00000620789 CAPRIN1Q14444 709 aaKnown RBP16.53■□□□□ 0.24
LITAF-220ENST00000620789 SF3B4Q15427 424 aaKnown RBP eCLIP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms