RNA–Protein interactions for RNA: ENST00000619874.4

SMIM11B-202, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-202ENST00000619874 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 CCNL2Q96S94 520 aaPredicted RBP12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 HHATLQ9HCP6 504 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 EXOSC3Q9NQT5 275 aaKnown RBP12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 MAN2C1Q9NTJ4 1040 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 RLIMQ9NVW2 624 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 FBXO34Q9NWN3 711 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 KCNE5Q9UJ90 142 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 PCDHGA3Q9Y5H0 932 aa12.66□□□□□ -0.38
SMIM11B-202ENST00000619874 A0A087WXM4 84 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 LOC102723996A0A087X1L8 192 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 A0A1W2PQD3 144 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CDC14CA4D256 554 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 E9PQ18 207 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 AGRPO00253 132 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 FRS3O43559 492 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CSO75390 466 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 SEC24DO94855 1032 aaPredicted RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CLIC3O95833 236 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 MT-CO3P00414 261 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CSTAP01040 98 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CYP4B1P13584 511 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 OSMP13725 252 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 TBXA2RP21731 343 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CLK3P49761 638 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 GPR143P51810 404 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 EFNA3P52797 238 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 PNLIPRP2P54317 469 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CDC42P60953 191 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CXCR4P61073 352 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CSNK2BP67870 215 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 IL5RAQ01344 420 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 TARDBPQ13148 414 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 APOFQ13790 326 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CCDC157Q569K6 752 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 ANKRD34AQ69YU3 496 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 FAAH2Q6GMR7 532 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 C1orf94Q6P1W5 598 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 WDR36Q8NI36 951 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 GNPDA2Q8TDQ7 276 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 FBLIM1Q8WUP2 373 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 GTPBP3Q969Y2 492 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 HS6ST2Q96MM7 605 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 WFDC6Q9BQY6 131 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 B3GNT4Q9C0J1 378 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 TMEM5Q9Y2B1 443 aa12.65□□□□□ -0.38
SMIM11B-202ENST00000619874 CACNA1AO00555 2505 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 CLDN24A6NM45 220 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 CHP2O43745 196 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 REM1O75628 298 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 UTS2O95399 124 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 CLPTM1O96005 669 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 GASTP01350 101 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 CCDC159P0C7I6 412 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 ZNF28P17035 718 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 NAGAP17050 411 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 GGT2P36268 569 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 FOLR3P41439 243 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 SLC6A8P48029 635 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 TMED10P49755 219 aaKnown RBP12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 NR0B1P51843 470 aaKnown RBP12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 CRISP1P54107 249 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 SLC26A5P58743 744 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 COPZ1P61923 177 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 RNF4P78317 190 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 RPP38P78345 283 aaKnown RBP12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 TCF15Q12870 199 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 RAPSNQ13702 412 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 SEC23BQ15437 767 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 OR1Q1Q15612 314 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 EXT1Q16394 746 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 KLHL26Q53HC5 615 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 KLHL17Q6TDP4 642 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 C6orf15Q6UXA7 325 aaPredicted RBP12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 SHISA6Q6ZSJ9 500 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 MBOAT2Q6ZWT7 520 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 LSMEM1Q8N8F7 131 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 NFAM1Q8NET5 270 aaPredicted RBP12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 TSPAN14Q8NG11 270 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 OMA1Q96E52 524 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 PRRG3Q9BZD7 231 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 VCX3AQ9NNX9 186 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 IMPAD1Q9NX62 359 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 RPS6KB2Q9UBS0 482 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 PISDQ9UG56 409 aa12.64□□□□□ -0.39
SMIM11B-202ENST00000619874 PADI1Q9ULC6 663 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms