RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PINK1Q9BXM7 581 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 PLGRKTQ9HBL7 147 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 ATP13A2Q9NQ11 1180 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 MS4A12Q9NXJ0 267 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 HCN3Q9P1Z3 774 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 RHCGQ9UBD6 479 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 TP53TG5Q9Y2B4 290 aa19.91■□□□□ 0.78
SGMS1-210ENST00000619438 SH3D21A4FU49 640 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 BCAS1O75363 584 aaPredicted RBP19.9■□□□□ 0.78
SGMS1-210ENST00000619438 ALOX12P18054 663 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 ZNF10P21506 573 aaPredicted RBP19.9■□□□□ 0.78
SGMS1-210ENST00000619438 MAP2K4P45985 399 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 PRKAG1P54619 331 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 TBCEQ15813 527 aaPredicted RBP19.9■□□□□ 0.78
SGMS1-210ENST00000619438 DEFB134Q4QY38 66 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 NUP43Q8NFH3 380 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 NR4A3Q92570 626 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 GTPBP3Q969Y2 492 aaKnown RBP19.9■□□□□ 0.78
SGMS1-210ENST00000619438 RHNO1Q9BSD3 238 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 COPS4Q9BT78 406 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 UCK2Q9BZX2 261 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 TGIF2Q9GZN2 237 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 NECTIN3Q9NQS3 549 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 MKL2Q9ULH7 1088 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 A4GNTQ9UNA3 340 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 HS3ST3B1Q9Y662 390 aa19.9■□□□□ 0.78
SGMS1-210ENST00000619438 BAHCC1Q9P281 2608 aa19.89■□□□□ 0.78
SGMS1-210ENST00000619438 IDSB3KWA1 339 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 SYT5O00445 386 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 OSMP13725 252 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 ZNF182P17025 639 aaPredicted RBP19.89■□□□□ 0.77
SGMS1-210ENST00000619438 CHMP24386 653 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 MINDY4Q4G0A6 757 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 FAAH2Q6GMR7 532 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 NIPAL1Q6NVV3 410 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 KIRREL2Q6UWL6 708 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 ASB18Q6ZVZ8 466 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 AHSA2Q719I0 299 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 TANKQ92844 425 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 TRNT1Q96Q11 434 aaKnown RBP19.89■□□□□ 0.77
SGMS1-210ENST00000619438 OR7D2Q96RA2 312 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 IMPAD1Q9NX62 359 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 REV1Q9UBZ9 1251 aa19.89■□□□□ 0.77
SGMS1-210ENST00000619438 HELZ2Q9BYK8 2649 aaKnown RBP19.89■□□□□ 0.77
SGMS1-210ENST00000619438 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 SLC22A1O15245 554 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 RDH16O75452 317 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 CDK1P06493 297 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 INHBBP09529 407 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 C8orf89P0DMQ9 161 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 STT3AP46977 705 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 IDH2P48735 452 aaKnown RBP19.88■□□□□ 0.77
SGMS1-210ENST00000619438 SEC23BQ15437 767 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 MOGQ16653 247 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 CD300LDQ6UXZ3 194 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 LINC00299Q6ZSB3 139 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 RBM45Q8IUH3 476 aaKnown RBP19.88■□□□□ 0.77
SGMS1-210ENST00000619438 FDCSPQ8NFU4 85 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 OR9A2Q8NGT5 310 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 GIMAP5Q96F15 307 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 ACTRT3Q9BYD9 372 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 LYRM4Q9HD34 91 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 GIN1Q9NXP7 522 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 FBXL4Q9UKA2 621 aa19.88■□□□□ 0.77
SGMS1-210ENST00000619438 SH3PXD2BA1X283 911 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 ZNF860A6NHJ4 632 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 DUXAA6NLW8 204 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 SOCS6O14544 535 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 B3GALT2O43825 422 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 UGT2B17O75795 530 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 FADS2O95864 444 aaKnown RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 EPPINO95925 133 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 AGR2O95994 175 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 MC3RP41968 323 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 PGDP52209 483 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 AQP6Q13520 282 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 DEF8Q6ZN54 512 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 PRICKLE2Q7Z3G6 844 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 LACC1Q8IV20 430 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 LRRC25Q8N386 305 aaPredicted RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 TEX19Q8NA77 164 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 VANGL1Q8TAA9 524 aaPredicted RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 METTL21AQ8WXB1 218 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 GGHQ92820 318 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 C16orf58Q96GQ5 468 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 GPR83Q9NYM4 423 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 DAPP1Q9UN19 280 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 PCDHGA9Q9Y5G4 932 aaKnown RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 A0A1W2PS29 197 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 K7EM74 188 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 MASP2O00187 686 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 GALR3O60755 368 aaPredicted RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 POU2F1P14859 743 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 CPN2P22792 545 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 TLX1P31314 330 aaPredicted RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 UGT2B15P54855 530 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 ALDH6A1Q02252 535 aaKnown RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 COX10Q12887 443 aa19.87■□□□□ 0.77
SGMS1-210ENST00000619438 AIMP2Q13155 320 aaKnown RBP19.87■□□□□ 0.77
SGMS1-210ENST00000619438 HEPHL1Q6MZM0 1159 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms