RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 S100A5P33763 92 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 CAPZBP47756 277 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 CTAG1AP78358 180 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 BNC1Q01954 994 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 DECR1Q16698 335 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 EIPR1Q53HC9 387 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 SCAIQ8N9R8 606 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 OR13C2Q8NGS9 318 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 SMAP2Q8WU79 429 aaPredicted RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 TMEM239Q8WW34 195 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 S100ZQ8WXG8 99 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 TM9SF4Q92544 642 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 TM9SF2Q99805 663 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 OR52D1Q9H346 318 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 FOLH1BQ9HBA9 442 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 DHCR7Q9UBM7 475 aaKnown RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 LRRN3E7EW58 273 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 PLD2O14939 933 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 PRODHO43272 600 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 AQP9O43315 295 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 BRINP1O60477 761 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 RFPL3O75679 317 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 OR5F1O95221 314 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 SCG5P05408 212 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 TSPAN19P0C672 248 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 SLC35E2P0CK97 266 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 BCKDHBP21953 392 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 RPS19P39019 145 aaKnown RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 FOXL2P58012 376 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 FZD5Q13467 585 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 ZNF791Q3KP31 576 aaPredicted RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 MINDY4Q4G0A6 757 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 MEDAGQ5VYS4 303 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 C22orf42Q6IC83 251 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 PLBD1Q6P4A8 553 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 ZNF620Q6ZNG0 422 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 TTLL10Q6ZVT0 673 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 GKN2Q86XP6 184 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 ESX1Q8N693 406 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 CYB561A3Q8NBI2 242 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 OR51G2Q8NGK0 314 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 C1GALT1C1Q96EU7 318 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 AHCYL2Q96HN2 611 aaKnown RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 TWSG1Q9GZX9 223 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 LRRN3Q9H3W5 708 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 HINT3Q9NQE9 182 aaKnown RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 FAIMQ9NVQ4 179 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 CNTRLQ7Z7A1 2325 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 A0A087WV62 115 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 SULT1C4O75897 302 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 DCNP07585 359 aaKnown RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 NME1P15531 152 aaKnown RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 FPR3P25089 353 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 SLC9A3P48764 834 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 OR1D5P58170 312 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 ZNHIT3Q15649 155 aaPredicted RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 PHC2Q8IXK0 858 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 GJD3Q8N144 294 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 RCBTB1Q8NDN9 531 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 FAM83FQ8NEG4 500 aaPredicted RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 CTHRC1Q96CG8 243 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 TTTY10Q9BZA0 68 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 OR51V1Q9H2C8 321 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 UBQLN3Q9H347 655 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 FBXO8Q9NRD0 319 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 PNO1Q9NRX1 252 aaKnown RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 GPR27Q9NS67 375 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 SIDT1Q9NXL6 827 aaKnown RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 IL20Q9NYY1 176 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 H2AFY2Q9P0M6 372 aaPredicted RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 LRIT1Q9P2V4 623 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 KLK4Q9Y5K2 254 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 WDFY3Q8IZQ1 3526 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 RHPN2P1A8MT19 583 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 SURF4O15260 269 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 GYPBP06028 91 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 ZGLP1P0C6A0 271 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 ZNF12P17014 697 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 RHAGQ02094 409 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 CARTPTQ16568 116 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 PGGHGQ32M88 737 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 GXYLT1Q4G148 440 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 MANEAQ5SRI9 462 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 THSD4Q6ZMP0 1018 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 SYT14Q8NB59 555 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 OR2T33Q8NG76 320 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 OR51Q1Q8NH59 317 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 FANK1Q8TC84 345 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 OSTF1Q92882 214 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 EFHD2Q96C19 240 aaPredicted RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 SMAD5Q99717 465 aaKnown RBP11.48□□□□□ -0.57
CIITA-212ENST00000618207 HCAR1Q9BXC0 346 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 SLC2A4RGQ9NR83 387 aa11.48□□□□□ -0.57
CIITA-212ENST00000618207 TESQ9UGI8 421 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms