RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 RNF220Q5VTB9 566 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 IRAK1BP1Q5VVH5 260 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 JMJD6Q6NYC1 403 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 AAGABQ6PD74 315 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CLEC18BQ6UXF7 455 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 IL20RBQ6UXL0 311 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 FKBP9P1Q75LS8 142 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 MARCH3Q86UD3 253 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ZDHHC21Q8IVQ6 265 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 GALNT16Q8N428 558 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SLC5A8Q8N695 610 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SLC15A4Q8N697 577 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CLEC18CQ8NCF0 446 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 FAM71CQ8NEG0 241 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 OR6T1Q8NGN1 323 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SPPL2AQ8TCT8 520 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 GEMIN6Q8WXD5 167 aaKnown RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ASB15Q8WXK1 588 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 LRTOMTQ8WZ04 291 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 PMM1Q92871 262 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SPACA9Q96E40 222 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 VPS50Q96JG6 964 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF354BQ96LW1 612 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SPATA5L1Q9BVQ7 753 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CHID1Q9BWS9 393 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 UGT2B28Q9BY64 529 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 PROK2Q9HC23 129 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 GALNT9Q9HCQ5 603 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SH2D2AQ9NP31 389 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 UBQLN4Q9NRR5 601 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ARMC1Q9NVT9 282 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ANKRD10Q9NXR5 420 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 GPR83Q9NYM4 423 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 RIMS3Q9UJD0 308 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CNOT11Q9UKZ1 510 aaKnown RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 YARS2Q9Y2Z4 477 aaKnown RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 IFT52Q9Y366 437 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 DTNAQ9Y4J8 743 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 AP4S1Q9Y587 144 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CHCHD2Q9Y6H1 151 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 UBR5O95071 2799 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 KIAA1549Q9HCM3 1950 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 A0A0G2JMM0 328 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 A0A1W2PPB8 328 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 A0A1W2PQD3 144 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 A0A1W2PRS3 328 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 CDHR4A6H8M9 788 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 KIR3DP1A8MWS1 328 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ALG1L2C9J202 215 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 FFAR1O14842 300 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 DPM1O60762 260 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 NTN1O95631 604 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 IFNA14P01570 189 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 THY1P04216 161 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 RAP2AP10114 183 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ANPEPP15144 967 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 IL7RP16871 459 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 NAGAP17050 411 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PSMA4P25789 261 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 LCN1P31025 176 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 EVI2BP34910 448 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 IST1P53990 364 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PSMD4P55036 377 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PSPHP78330 225 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF117Q03924 483 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PPP1R8Q12972 351 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 SKP2Q13309 424 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 EFR3AQ14156 821 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 LARS2Q15031 903 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 INPP5JQ15735 1006 aaPredicted RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 MEP1AQ16819 746 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ZFP1Q6P2D0 407 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 OPN5Q6U736 354 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 CBLN3Q6UW01 205 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 IGFL3Q6UXB1 125 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 LINC00696Q6ZRV3 163 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 NUP54Q7Z3B4 507 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 MDGA2Q7Z553 956 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 TMEM179BQ7Z7N9 219 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 AMIGO2Q86SJ2 522 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PQLC1Q8N2U9 271 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 RBMXL3Q8N7X1 1067 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 Q8NA96 180 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 CLEC1AQ8NC01 280 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PHF10Q8WUB8 498 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PROX1Q92786 737 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 STMN2Q93045 179 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 SIGLEC12Q96PQ1 595 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF552Q9H707 407 aaPredicted RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 RNPEPL1Q9HAU8 725 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 NTN4Q9HB63 628 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 IL1RAPQ9NPH3 570 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 CTPS2Q9NRF8 586 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 PLA2G3Q9NZ20 509 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 NDUFAF4Q9P032 175 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 MRTO4Q9UKD2 239 aaKnown RBP7.34□□□□□ -1.23
PCDH9-205ENST00000614931 BAG5Q9UL15 447 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 SH3GLB1Q9Y371 365 aa7.34□□□□□ -1.23
PCDH9-205ENST00000614931 ENPP4Q9Y6X5 453 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms