RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 STMN4Q9H169 189 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 SLC38A1Q9H2H9 487 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 MED17Q9NVC6 651 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 PACSIN3Q9UKS6 424 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 A0A0J9YW62 118 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 LOC100653049A0A140TA62 436 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ALG1L2C9J202 215 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 FBP2O00757 339 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 RFXANKO14593 260 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TPST1O60507 370 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 BCAS2O75934 225 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 KRT34O76011 436 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 NUDT14O95848 222 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 BCHEP06276 602 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF708P17019 499 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 NAGAP17050 411 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ENPP1P22413 925 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 NTF4P34130 210 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 CRATP43155 626 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 C21orf58P58505 322 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 MTPNP58546 118 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 SIRPAP78324 504 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 RBPJQ06330 500 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 BNIP2Q12982 314 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 GPAT3Q53EU6 434 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 C1orf185Q5T7R7 199 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ANKRD34AQ69YU3 496 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 SAMD14Q8IZD0 417 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZFP28Q8NHY6 868 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 LINC01560Q8TB33 94 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 GPR119Q8TDV5 335 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ACTRT2Q8TDY3 377 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 MARVELD3Q96A59 401 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF764Q96H86 408 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 MAGEB18Q96M61 343 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 CCDC115Q96NT0 180 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 UCN2Q96RP3 112 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM120AQ9BXJ8 343 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 FAM107BQ9H098 131 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 FAF1Q9UNN5 650 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZC3H12DA2A288 527 aaKnown RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 LINGO3P0C6S8 592 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TBXA2RP21731 343 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 PON3Q15166 354 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 PLPPR5Q32ZL2 321 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 WLSQ5T9L3 541 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TSPYL5Q86VY4 417 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TMCO5AQ8N6Q1 288 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 GOLGA6L1Q8N7Z2 621 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF527Q8NB42 609 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 FBXO27Q8NI29 283 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ABHD3Q8WU67 409 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 SLC38A5Q8WUX1 472 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 RND1Q92730 232 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ROPN1LQ96C74 230 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 NEURL3Q96EH8 262 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ARL5BQ96KC2 179 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 THUMPD3Q9BV44 507 aaKnown RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 OR2B2Q9GZK3 357 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 PRDM14Q9GZV8 571 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TP63Q9H3D4 680 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF385DQ9H6B1 395 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 DUSP22Q9NRW4 184 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ARGLU1Q9NWB6 273 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 TLN2Q9Y4G6 2542 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 NIPBLQ6KC79 2804 aaeCLIP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 EIF1AYO14602 144 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 POLR3GO15318 223 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CLDN14O95500 239 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SRD5A2P31213 254 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 GSTM5P46439 218 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 POU4F3Q15319 338 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 HEPHL1Q6MZM0 1159 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ERP27Q96DN0 273 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF350Q9GZX5 532 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 OPN3Q9H1Y3 402 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TPT1P8Q9HAU6 139 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CTPS2Q9NRF8 586 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ATAD3AQ9NVI7 634 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 FAM120CQ9NX05 1096 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SEC14L4Q9UDX3 406 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 FLNAP21333 2647 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TRPC5OSA6NMA1 111 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CXCL13O43927 109 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 HCN1O60741 890 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SHOX2O60902 331 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 GCM2O75603 506 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TNFSF13O75888 250 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 OPN1SWP03999 348 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 UQCRC2P22695 453 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ELAVL4P26378 380 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 EIF1AXP47813 144 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 FAM27E3Q08E93 113 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 MAD2L1Q13257 205 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF630Q2M218 657 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 PDCD4Q53EL6 469 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 RABL3Q5HYI8 236 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 BLOC1S3Q6QNY0 202 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms