RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NDE1Q9NXR1 346 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 KCNE5Q9UJ90 142 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 LIPGQ9Y5X9 500 aa12.06□□□□□ -0.48
MDC1-209ENST00000613547 CENPVL1A0A0U1RR11 272 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 PRORSD1PA6NEY8 169 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 C17orf51A8MQB3 221 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 LINC01387J3KSC0 135 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 PRRG2O14669 202 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 SERPINB7O75635 380 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 CYP7B1O75881 506 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 WISP1O95388 367 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 ACTL6AO96019 429 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 THBS1P07996 1170 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 UBTFL6P0CB48 400 aaPredicted RBP12.05□□□□□ -0.48
MDC1-209ENST00000613547 ESRRAP11474 423 aaPredicted RBP12.05□□□□□ -0.48
MDC1-209ENST00000613547 NID1P14543 1247 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 UQCRBP14927 111 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 HK1P19367 917 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 PCGF2P35227 344 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 MXRA7P84157 204 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 SKP2Q13309 424 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 KRT72Q14CN4 511 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 MAPK11Q15759 364 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 MAPK14Q16539 360 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 GLYR1Q49A26 553 aaPredicted RBP12.05□□□□□ -0.48
MDC1-209ENST00000613547 EIPR1Q53HC9 387 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 WLSQ5T9L3 541 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 RAET1LQ5VY80 246 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 HMGN2P46Q86SG4 172 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 SPPL2CQ8IUH8 684 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 EID3Q8N140 333 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 C10orf111Q8N326 155 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 ZBTB8AQ96BR9 441 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 C1GALT1C1Q96EU7 318 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 SFXN2Q96NB2 322 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 PIGQQ9BRB3 760 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 LAT2Q9GZY6 243 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 STOML1Q9UBI4 398 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 ACAD8Q9UKU7 415 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 OSGIN2Q9Y236 505 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 HRH3Q9Y5N1 445 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 NUP214P35658 2090 aaPredicted RBP12.05□□□□□ -0.48
MDC1-209ENST00000613547 MYO18BQ8IUG5 2567 aa12.05□□□□□ -0.48
MDC1-209ENST00000613547 NBASA2RRP1 2371 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 NPIPA2E9PIF3 369 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 NPIPA3F8WFD2 350 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 WISP2O76076 250 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 TPOP07202 933 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 PABPC4LP0CB38 370 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 PGCP20142 388 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 RPS4Y1P22090 263 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 EIF1P41567 113 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 SLC6A8P48029 635 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 CPA2P48052 419 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 CBFBQ13951 182 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ADRM1Q16186 407 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 VMACQ2NL98 169 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 MRPL2Q5T653 305 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 RNF220Q5VTB9 566 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 CBLN3Q6UW01 205 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ENPP6Q6UWR7 440 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 PATL1Q86TB9 770 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 PTOV1Q86YD1 416 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ZZZ3Q8IYH5 903 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ZNF440Q8IYI8 595 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 OR5W2Q8NH69 310 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 FAM57AQ8TBR7 257 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ZG16BQ96DA0 208 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ARSGQ96EG1 525 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 REXO5Q96IC2 774 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 GPATCH1Q9BRR8 931 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 PIF1Q9H611 641 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 SPAG4Q9NPE6 437 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 EXOSC3Q9NQT5 275 aaKnown RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 ARL8BQ9NVJ2 186 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ICAM5Q9UMF0 924 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 ZNF443Q9Y2A4 671 aaPredicted RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 RPH3AQ9Y2J0 694 aaPredicted RBP12.04□□□□□ -0.48
MDC1-209ENST00000613547 EXPH5Q8NEV8 1989 aa12.04□□□□□ -0.48
MDC1-209ENST00000613547 TRGV8A0A0C4DH27 118 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 FAM220BPB1ANY3 271 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 ZIC3O60481 467 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 DNAJA2O60884 412 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 ZNF17P17021 662 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 TCEA1P23193 301 aaKnown RBP12.03□□□□□ -0.48
MDC1-209ENST00000613547 CHMP24386 653 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 AQP1P29972 269 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 PGM1P36871 562 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 UQCRFS1P47985 274 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 SLC7A2P52569 658 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 PSME3P61289 254 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 VEZF1Q14119 521 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 SF3B4Q15427 424 aaKnown RBP eCLIP12.03□□□□□ -0.48
MDC1-209ENST00000613547 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
MDC1-209ENST00000613547 NDUFAF6Q330K2 333 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 NHSL2Q5HYW2 709 aa12.03□□□□□ -0.48
MDC1-209ENST00000613547 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms