RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 C7orf26Q96N11 449 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 KCNA7Q96RP8 456 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PKP2Q99959 881 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TACO1Q9BSH4 297 aaKnown RBP6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 FAIM2Q9BWQ8 316 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 MRPL1Q9BYD6 325 aaKnown RBP6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 METTL17Q9H7H0 456 aaPredicted RBP6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 FAIMQ9NVQ4 179 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 C1orf109Q9NX04 203 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ZDHHC2Q9UIJ5 367 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PSME2Q9UL46 239 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 CCL27Q9Y4X3 112 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ASB4Q9Y574 426 aa6.38□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TRPC5OSA6NMA1 111 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 LINC01387J3KSC0 135 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 RTCAO00442 366 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 LSM1O15116 133 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ITM2AO43736 263 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PCDH7O60245 1069 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 SH3BGRLO75368 114 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TNFRSF21O75509 655 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 EEDO75530 441 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 CBR3O75828 277 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 LY6HO94772 140 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 CLPSP04118 112 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 NR2F6P10588 404 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 BMP4P12644 408 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 IL11P20809 199 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ADH6P28332 368 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 MAPK1P28482 360 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TIA1P31483 386 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ARRB2P32121 409 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TTKP33981 857 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 GALNSP34059 522 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 STT3AP46977 705 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 LIMS1P48059 325 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 HTR6P50406 440 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 EFNA4P52798 201 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 IGLV3-21P80748 117 aaPredicted RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 HMGCS1Q01581 520 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TNFRSF17Q02223 184 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ID2Q02363 134 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 BSPH1Q075Z2 132 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ZNF763Q0D2J5 394 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 MAD2L1Q13257 205 aaPredicted RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 HEPACAMQ14CZ8 416 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 KIAA0040Q15053 153 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 EBPQ15125 230 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ATP6AP1LQ52LC2 224 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 XKR7Q5GH72 579 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 FIGNL1Q6PIW4 674 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 Q6ZSR9 355 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 USP43Q70EL4 1123 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 IKBIPQ70UQ0 350 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 IFNEQ86WN2 208 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 DDIASQ8IXT1 998 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 FAM9CQ8IZT9 166 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 RNF175Q8N4F7 328 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 C1orf52Q8N6N3 182 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ZNF781Q8N8C0 355 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 WDSUB1Q8N9V3 476 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PIWIL2Q8TC59 973 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 DOK4Q8TEW6 326 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ZNF418Q8TF45 676 aaPredicted RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ZNF75CPQ92670 426 aaPredicted RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 MRPL24Q96A35 216 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 C3orf49Q96BT1 292 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 S100PBPQ96BU1 408 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ZBTB9Q96C00 473 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 APIPQ96GX9 242 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 FCRL1Q96LA6 429 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 MAGEB18Q96M61 343 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 GAL3ST4Q96RP7 486 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 SORT1Q99523 831 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 MAPKAP1Q9BPZ7 522 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PELOQ9BRX2 385 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 C20orf27Q9GZN8 174 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 WWTR1Q9GZV5 400 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TUBB1Q9H4B7 451 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 RPF2Q9H7B2 306 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TNFRSF12AQ9NP84 129 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 SERHLQ9NQF3 203 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 CBLN4Q9NTU7 201 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 EHD3Q9NZN3 535 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ING1Q9UK53 422 aaPredicted RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 EXO1Q9UQ84 846 aaKnown RBP6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ARFGEF3Q5TH69 2177 aa6.37□□□□□ -1.39
PTCHD3P1-201ENST00000612350 GNG14A0A1W2PPG7 69 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 A0A1W2PR48 441 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 CAPN14A8MX76 684 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 H7C417 338 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 PIP5K1BO14986 540 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 SMAD9O15198 467 aaKnown RBP6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 HDAC3O15379 428 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 DYRK3O43781 588 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 TMPRSS11DO60235 418 aa6.36□□□□□ -1.39
PTCHD3P1-201ENST00000612350 ICOSLGO75144 302 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms