RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 THAP7Q9BT49 309 aaPredicted RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 PLA2G12AQ9BZM1 189 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 OR8D2Q9GZM6 311 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 TMEM168Q9H0V1 697 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 FOLH1BQ9HBA9 442 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
LIG4-204ENST00000611712 NUDT15Q9NV35 164 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 MED17Q9NVC6 651 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 KCNE3Q9Y6H6 103 aa8.11□□□□□ -1.11
LIG4-204ENST00000611712 DICER1Q9UPY3 1922 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 TRDV1A0A1B0GX56 115 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 CPEP16870 476 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 HTR1FP30939 366 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 GUCA1AP43080 201 aaPredicted RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 MVDP53602 400 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 CTBP2P56545 445 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 GNG2P59768 71 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 POU4F2Q12837 409 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 FBXO46Q6PJ61 603 aaPredicted RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 OR8K3Q8NH51 312 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 CREB3L4Q8TEY5 395 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TNFAIP8L1Q8WVP5 186 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 SLC35A4Q96G79 324 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 MRPL15Q9P015 296 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 IER3IP1Q9Y5U9 82 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TCRBV21S2A2A0A5A6 115 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 FAM171A2A8MVW0 826 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 H0YGG7 62 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 SLC2A10O95528 541 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 GPR75O95800 540 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 HBQ1P09105 142 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TEAD1P28347 426 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 SHC1P29353 583 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TSC2P49815 1807 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 GPR143P51810 404 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 ARF3P61204 181 aaPredicted RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 DUSP5Q16690 384 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TMEM31Q5JXX7 168 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 ZNF793Q6ZN11 406 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 SFTPA1Q8IWL2 248 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 UBQLNLQ8IYU4 475 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 PIAS4Q8N2W9 510 aaPredicted RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 ARSGQ96EG1 525 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 KATNB1Q9BVA0 655 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 RBFOX1Q9NWB1 397 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 CKLFQ9UBR5 152 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 BAIAP2Q9UQB8 552 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 AK6Q9Y3D8 172 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 A6NL46 340 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 RHPN2P1A8MT19 583 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 FAM47E-STBD1D6RA91 191 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 PSMD9O00233 223 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 PPM1BO75688 479 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 NDUFB2O95178 105 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 CXCR1P25024 350 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 HTR2BP41595 481 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 ACTA2P62736 377 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 ACTG2P63267 376 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 FABP5Q01469 135 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TRMT12Q53H54 448 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 EOGTQ5NDL2 527 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 MTFR2Q6P444 385 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 LINC01555Q8NAE3 123 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 OR52R1Q8NGF1 315 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 RPLP0P6Q8NHW5 317 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 PHOSPHO2Q8TCD6 241 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 DEDD2Q8WXF8 326 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 S100A16Q96FQ6 103 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 SNX18Q96RF0 628 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 G6PC3Q9BUM1 346 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 TAS2R10Q9NYW0 307 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 TBC1D29Q9UFV1 150 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
LIG4-204ENST00000611712 SLC35A3Q9Y2D2 325 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 CCDC88CQ9P219 2028 aa8.1□□□□□ -1.11
LIG4-204ENST00000611712 A0A0A6YYD5 115 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TMEM221A6NGB7 291 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 RNF13O43567 381 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 MOSPD3O75425 235 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TOXO94900 526 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SEMG1P04279 462 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 CD3GP09693 182 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TFPIP10646 304 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ANXA3P12429 323 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 DRD5P21918 477 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SOX18P35713 384 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 HTR3AP46098 478 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 PYHIN1Q6K0P9 492 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 DNAJC5GQ8N7S2 189 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 OR7G2Q8NG99 324 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 PMEPA1Q969W9 287 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ZG16BQ96DA0 208 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 C5orf34Q96MH7 638 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms