RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SDK1Q7Z5N4 2213 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 BLACEA4D250 179 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 FAM183AA6NL82 134 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 PRAMEF2O60811 474 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 HMGN1P05114 100 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TSPAN19P0C672 248 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 SAGP10523 405 aaPredicted RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 BMP7P18075 431 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 NXPH1P58417 271 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 IGLV3-21P80748 117 aaPredicted RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 KCNAB1Q14722 419 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 AMZ1Q400G9 498 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 C14orf28Q4W4Y0 310 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 AADACL4Q5VUY2 407 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 GARNL3Q5VVW2 1013 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 PTCRAQ6ISU1 281 aaPredicted RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 NPSR1Q6W5P4 371 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 SIX5Q8N196 739 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 RCBTB1Q8NDN9 531 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 OR4F15Q8NGB8 312 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ADAMTS18Q8TE60 1221 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 BPIFA2Q96DR5 249 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ZNF285Q96NJ3 590 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ASPNQ9BXN1 380 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 Q9N2J8 555 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 H2AFY2Q9P0M6 372 aaPredicted RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 MED31Q9Y3C7 131 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TMEM129A0AVI4 362 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 STK25O00506 426 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ADAM11O75078 769 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
NEK3-205ENST00000610828 ATP6V1E1P36543 226 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 GPR3P46089 330 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 FXYD6P3P58550 94 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 PRKCDQ05655 676 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TMEM44Q2T9K0 475 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TCTE1Q5JU00 501 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ZNF613Q6PF04 617 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 GDPGP1Q6ZNW5 385 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 LHFPL3Q86UP9 236 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 C16orf52Q8NHV5 167 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 BRIX1Q8TDN6 353 aaKnown RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 HLA-CQ95604 372 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TMEM203Q969S6 136 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ZDHHC12Q96GR4 267 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 AHCYL2Q96HN2 611 aaKnown RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 KCNS3Q9BQ31 491 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 ENKD1Q9H0I2 346 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 PCED1AQ9H1Q7 454 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 HINT3Q9NQE9 182 aaKnown RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 DNAJB12Q9NXW2 375 aaKnown RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 SSR3Q9UNL2 185 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 EXOSC1Q9Y3B2 195 aaKnown RBP12.59□□□□□ -0.39
NEK3-205ENST00000610828 OR10H1Q9Y4A9 318 aa12.59□□□□□ -0.39
NEK3-205ENST00000610828 TMEM265A0A087WTH1 108 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.58□□□□□ -0.4
NEK3-205ENST00000610828 IL9P15248 144 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CPEP16870 476 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CD1CP29017 333 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CD40LGP29965 261 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 STARD6P59095 220 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
NEK3-205ENST00000610828 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CXXC5Q7LFL8 322 aaKnown RBP12.58□□□□□ -0.4
NEK3-205ENST00000610828 BMP8AQ7Z5Y6 402 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 NELL2Q99435 816 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 YIPF2Q9BWQ6 316 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 MROQ9BYG7 248 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 OR10A5Q9H207 317 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 PRO3102Q9H379 93 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
NEK3-205ENST00000610828 FLRT3Q9NZU0 649 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 LRIT1Q9P2V4 623 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CBLCQ9ULV8 474 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 PEX16Q9Y5Y5 336 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 A0A0B4J2E0 115 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 A0A1B0GX12 115 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 TAF4O00268 1085 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 SOCS6O14544 535 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 ZNF749O43361 778 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CHP2O43745 196 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 RFPL3O75679 317 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 LIMS3P0CW19 117 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 LIMS4P0CW20 117 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CT45A8P0DMV1 189 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 CT45A9P0DMV2 189 aa12.58□□□□□ -0.4
NEK3-205ENST00000610828 RPS19P39019 145 aaKnown RBP12.58□□□□□ -0.4
NEK3-205ENST00000610828 SEPHS1P49903 392 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms