RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ANKRD34CP0C6C1 535 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 STOMP27105 288 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 ACSL1P33121 698 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 MAPK9P45984 424 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 CDK3Q00526 305 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 FZD5Q13467 585 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF620Q6ZNG0 422 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 RASSF6Q6ZTQ3 369 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF687Q8N1G0 1237 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 OR7G2Q8NG99 324 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 ZBP1Q9H171 429 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF780BQ9Y6R6 833 aa19■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF106Q9H2Y7 1883 aaKnown RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 SMAD9O15198 467 aaKnown RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ADRB1P08588 477 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 HTRA3P83110 453 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 TRMT12Q53H54 448 aaKnown RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 CDH24Q86UP0 819 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF485Q8NCK3 441 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ELP4Q96EB1 424 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 PDCD1LG2Q9BQ51 273 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 MED18Q9BUE0 208 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 SLC6A17Q9H1V8 727 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 SERGEFQ9UGK8 458 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 CLTBP09497 229 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 MPIP34949 423 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 NNATQ16517 81 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 KANSL1Q7Z3B3 1105 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF527Q8NB42 609 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF680Q8NEM1 530 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ACOT11Q8WXI4 607 aaPredicted RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 MS4A6EQ96DS6 147 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 PINK1Q9BXM7 581 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 RBCK1Q9BYM8 510 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ACSS1Q9NUB1 689 aaPredicted RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 INSL6Q9Y581 213 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 A0A087WV48 116 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 LRRC72A6NJI9 287 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 ATP5A1P25705 553 aaKnown RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 REEP5Q00765 189 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 PUS10Q3MIT2 529 aaKnown RBP18.99■□□□□ 0.63
SSBP3-216ENST00000610401 BHLHB9Q6PI77 547 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 POGLUT1Q8NBL1 392 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 GIMAP1Q8WWP7 306 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 GHSRQ92847 366 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 HYLS1Q96M11 299 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 OR10A4Q9H209 315 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 OR51J1Q9H342 316 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 PRKAG2Q9UGJ0 569 aa18.99■□□□□ 0.63
SSBP3-216ENST00000610401 A0A0G2JPF8 293 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 HNRNPCL2B2RXH8 293 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 HNRNPCL3B7ZW38 293 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 TSPAN4O14817 238 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 GMFGO60234 142 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 RFPL3O75679 317 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 PPP1R3DO95685 299 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 CFDP00746 253 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-216ENST00000610401 PROS1P07225 676 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 HNRNPCL4P0DMR1 293 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 SLC6A1P30531 599 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 PRDX1Q06830 199 aaKnown RBP18.98■□□□□ 0.63
SSBP3-216ENST00000610401 ZMYND11Q15326 602 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF77Q15935 545 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 ACSM3Q53FZ2 586 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 HES5Q5TA89 166 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 LILRA6Q6PI73 481 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 MTSS1LQ765P7 747 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 WDR89Q96FK6 387 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-216ENST00000610401 PEX11GQ96HA9 241 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 PTCHD1Q96NR3 888 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 APOBEC3BQ9UH17 382 aaKnown RBP18.98■□□□□ 0.63
SSBP3-216ENST00000610401 DPP7Q9UHL4 492 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF346Q9UL40 294 aaKnown RBP18.98■□□□□ 0.63
SSBP3-216ENST00000610401 KIAA1671Q9BY89 1806 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 IDSB3KWA1 339 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 MID1O15344 667 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 SLC31A1O15431 190 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 TCRBP04435 133 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 TNK1Q13470 666 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 CRMP1Q14194 572 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 ERN2Q76MJ5 926 aaKnown RBP18.98■□□□□ 0.63
SSBP3-216ENST00000610401 LUZP2Q86TE4 346 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 NRSN1Q8IZ57 195 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 OR5M3Q8NGP4 307 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 OR2T35Q8NGX2 323 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 DERL3Q96Q80 235 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 KCNJ15Q99712 375 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 GAL3ST1Q99999 423 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 ZNF649Q9BS31 505 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 NIPAL2Q9H841 368 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 DEC1Q9P2X7 70 aa18.98■□□□□ 0.63
SSBP3-216ENST00000610401 CDHR4A6H8M9 788 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 HTR1FP30939 366 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 CD200R1LQ6Q8B3 271 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 LINGO2Q7L985 606 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 OR52L1Q8NGH7 329 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 SUSD6Q92537 303 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 CAMK1GQ96NX5 476 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 NANSQ9NR45 359 aa18.97■□□□□ 0.63
SSBP3-216ENST00000610401 LILRB3O75022 631 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms