RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 PRAMEF5Q5TYX0 476 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 PRAMEF6Q5VXH4 476 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 WSCD1Q658N2 575 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 OR8G2PQ6IF36 304 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 VITQ6UXI7 678 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 USP43Q70EL4 1123 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 SERINC5Q86VE9 423 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 TTC5Q8N0Z6 440 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 C4orf32Q8N8J7 132 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 OR5L2Q8NGL0 311 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 RAB3IL1Q8TBN0 382 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 SCFD1Q8WVM8 642 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 MTMR9Q96QG7 549 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 CHRDL1Q9BU40 450 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 TUBB1Q9H4B7 451 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 WRAP73Q9P2S5 460 aaPredicted RBP3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 CTSZQ9UBR2 303 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF639Q9UID6 485 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 USP16Q9Y5T5 823 aa3.35□□□□□ -1.87
AC004542.1-201ENST00000602955 RB1CC1Q8TDY2 1594 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 KRTAP29-1A8MX34 341 aaPredicted RBP3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 POP4O95707 220 aaKnown RBP3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 IGHG4P01861 327 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 CYP2B6P20813 491 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 IMPDH1P20839 514 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 GALP22466 123 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 UGT1A5P35504 534 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 EPS15P42566 896 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF154Q13106 437 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 DPYSL3Q14195 570 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC15A2Q16348 729 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 DPYSL2Q16555 572 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC25A52Q3SY17 297 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 TP53I3Q53FA7 332 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 TEX44Q53QW1 395 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 C2CD6Q53TS8 623 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 C6orf226Q5I0X4 101 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF57Q68EA5 555 aaPredicted RBP3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 ATL3Q6DD88 541 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF613Q6PF04 617 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 CCDC50Q8IVM0 306 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 KIR3DL3Q8N743 410 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF248Q8NDW4 579 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 FAM83FQ8NEG4 500 aaPredicted RBP3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 OR9A4Q8NGU2 314 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 MIPOL1Q8TD10 442 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 TMEM80Q96HE8 168 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF597Q96LX8 424 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 TCEANC2Q96MN5 208 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC38A2Q96QD8 506 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 OR5B2Q96R09 309 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 CITED1Q99966 193 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 NIPSNAP3BQ9BS92 247 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 MCRIP2Q9BUT9 160 aaKnown RBP3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 SPATA16Q9BXB7 569 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 HCAR1Q9BXC0 346 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 GLIPR2Q9H4G4 154 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 RAB20Q9NX57 234 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 SCML2Q9UQR0 700 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 IFT52Q9Y366 437 aa3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 AK6Q9Y3D8 172 aaKnown RBP3.34□□□□□ -1.87
AC004542.1-201ENST00000602955 USP6P35125 1406 aa3.34□□□□□ -1.88
AC004542.1-201ENST00000602955 IGHV2-70DA0A0C4DH43 119 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 A0A1B0GVL5 298 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 F5H6K3 240 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 H3BMQ9 156 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 RS1O15537 224 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 HPP00738 406 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 SERPINB2P05120 415 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 OXTRP30559 389 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 CCR1P32246 355 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 ACVR1BP36896 505 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 ETV5P41161 510 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 SSR1P43307 286 aaKnown RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 DUSP3P51452 185 aaPredicted RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 PRRX1P54821 245 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 OC90Q02509 493 aaPredicted RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 KLRC3Q07444 240 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 SRSF5Q13243 272 aaKnown RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 PLD1Q13393 1074 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 CNPY1Q3B7I2 92 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 ZNF506Q5JVG8 444 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 PRAMEF20Q5VT98 475 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 MEDAGQ5VYS4 303 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 RUSC1-AS1Q66K80 236 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 PAQR6Q6TCH4 344 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 PAQR7Q86WK9 346 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 ECHDC2Q86YB7 292 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 TGIF2LXQ8IUE1 241 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 EGFL6Q8IUX8 553 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 OR51G2Q8NGK0 314 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 EFHD2Q96C19 240 aaPredicted RBP3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 C10orf35Q96D05 121 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
AC004542.1-201ENST00000602955 COPS8Q99627 209 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms