RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 PRDM14Q9GZV8 571 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.53□□□□□ -0.4
SNRPA-209ENST00000601253 PNPLA3Q9NST1 481 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 ERRFI1Q9UJM3 462 aaPredicted RBP12.53□□□□□ -0.4
SNRPA-209ENST00000601253 ICAM5Q9UMF0 924 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 ARL2BPQ9Y2Y0 163 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 MEMO1Q9Y316 297 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 SLC6A5Q9Y345 797 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 L3MBTL1Q9Y468 752 aa12.53□□□□□ -0.4
SNRPA-209ENST00000601253 CENPVL1A0A0U1RR11 272 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 LOC100653049A0A140TA62 436 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 C5orf58C9J3I9 102 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ZNHIT1O43257 154 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 KRT34O76011 436 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 CSTAP01040 98 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 BCHEP06276 602 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 NUDT7P0C024 238 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ARAFP10398 606 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.41
SNRPA-209ENST00000601253 GABRA1P14867 456 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 CPN1P15169 458 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ACVR2AP27037 513 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 MAPK14Q16539 360 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 BCL2A1Q16548 175 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 TMEM44Q2T9K0 475 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 RAET1LQ5VY80 246 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 REP15Q6BDI9 236 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 FJX1Q86VR8 437 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 PEX5LQ8IYB4 626 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 FAM71CQ8NEG0 241 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 OR8J3Q8NGG0 315 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 OR5W2Q8NH69 310 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 BBS10Q8TAM1 723 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 LRRC58Q96CX6 371 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ARSGQ96EG1 525 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 THUMPD3Q9BV44 507 aaKnown RBP12.52□□□□□ -0.41
SNRPA-209ENST00000601253 CCDC106Q9BWC9 280 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 TMEM38AQ9H6F2 299 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 RUBCNLQ9H714 662 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 CACYBPQ9HB71 228 aaKnown RBP12.52□□□□□ -0.41
SNRPA-209ENST00000601253 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
SNRPA-209ENST00000601253 GID8Q9NWU2 228 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 SH3BGRL2Q9UJC5 107 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 CARD8Q9Y2G2 431 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 RPH3AQ9Y2J0 694 aaPredicted RBP12.52□□□□□ -0.41
SNRPA-209ENST00000601253 ZGRF1Q86YA3 2104 aa12.52□□□□□ -0.41
SNRPA-209ENST00000601253 WIPF3A6NGB9 483 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 AHRRA9YTQ3 701 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 FXYD1O00168 92 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 OIP5O43482 229 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 DNAJA2O60884 412 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
SNRPA-209ENST00000601253 FAM107AO95990 144 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 LDLRP01130 860 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 THBS1P07996 1170 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 NID1P14543 1247 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 IL7RP16871 459 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 PGM1P36871 562 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 EIF1P41567 113 aaKnown RBP12.51□□□□□ -0.41
SNRPA-209ENST00000601253 KCNJ10P78508 379 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 CDK6Q00534 326 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 RBBP4Q09028 425 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 SKP2Q13309 424 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 CBFBQ13951 182 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 PLPPR5Q32ZL2 321 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 TMEM211Q6ICI0 200 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 ZNF585AQ6P3V2 769 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 CBLN3Q6UW01 205 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 ARSKQ6UWY0 536 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 RPTNQ6XPR3 784 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 ULK2Q8IYT8 1036 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 GTPBP8Q8N3Z3 284 aaPredicted RBP12.51□□□□□ -0.41
SNRPA-209ENST00000601253 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 WDR60Q8WVS4 1066 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 MAL2Q969L2 176 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 ZG16BQ96DA0 208 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 CMTM5Q96DZ9 223 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 DMRTA2Q96SC8 542 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 QRSL1Q9H0R6 528 aaKnown RBP12.51□□□□□ -0.41
SNRPA-209ENST00000601253 KAT8Q9H7Z6 458 aaKnown RBP12.51□□□□□ -0.41
SNRPA-209ENST00000601253 MED17Q9NVC6 651 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 STOML1Q9UBI4 398 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 TNFRSF10DQ9UBN6 386 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 HIVEP3Q5T1R4 2406 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
SNRPA-209ENST00000601253 ZNF407Q9C0G0 2248 aa12.5□□□□□ -0.41
SNRPA-209ENST00000601253 USP9XQ93008 2570 aaPredicted RBP12.5□□□□□ -0.41
SNRPA-209ENST00000601253 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
SNRPA-209ENST00000601253 GMFGO60234 142 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms