RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ZBTB8AQ96BR9 441 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 DOCK7Q96N67 2140 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 TRNT1Q96Q11 434 aaKnown RBP15.24■□□□□ 0.03
TRIM28-215ENST00000601150 TRIB1Q96RU8 372 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 TUBA1CQ9BQE3 449 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 CALHM2Q9HA72 323 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 SLC52A3Q9NQ40 469 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 MED17Q9NVC6 651 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 KCNE5Q9UJ90 142 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 CARD8Q9Y2G2 431 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 ZNF337Q9Y3M9 751 aa15.24■□□□□ 0.03
TRIM28-215ENST00000601150 A0A0G2JNJ9 132 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 C7orf72A4D263 438 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 ZNF264O43296 627 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 OIP5O43482 229 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 EIF4E2O60573 245 aaKnown RBP15.23■□□□□ 0.03
TRIM28-215ENST00000601150 H6PDO95479 791 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 NR2F1P10589 423 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 UBL4AP11441 157 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 CAPN3P20807 821 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 TIMP3P35625 211 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 ADH7P40394 386 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 CRATP43155 626 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 MVDP53602 400 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 SYPL1Q16563 259 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 PLPPR5Q32ZL2 321 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 CBLN3Q6UW01 205 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 SEM1Q6ZVN7 128 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 MEIOBQ8N635 442 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 ANKFN1Q8N957 763 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 AURKBQ96GD4 344 aaPredicted RBP15.23■□□□□ 0.03
TRIM28-215ENST00000601150 STOML1Q9UBI4 398 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 Q9UFV3 132 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 ICAM5Q9UMF0 924 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 PCDHB14Q9Y5E9 798 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 AP4B1Q9Y6B7 739 aa15.23■□□□□ 0.03
TRIM28-215ENST00000601150 HCFC1P51610 2035 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 HEATR5AQ86XA9 2040 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 CENPVL1A0A0U1RR11 272 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 A0A1W2PP18 115 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 HSPB2A8KAH6 182 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 KDM4EB2RXH2 506 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-215ENST00000601150 SHISA8B8ZZ34 492 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 H3BML4 177 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 TOXO94900 526 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 NUDT14O95848 222 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 IL2RAP01589 272 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 ETFAP13804 333 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 HOXB9P17482 250 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-215ENST00000601150 CEACAM8P31997 349 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-215ENST00000601150 ARFIP2P53365 341 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 EEFSECP57772 596 aaKnown RBP15.22■□□□□ 0.03
TRIM28-215ENST00000601150 DSTNP60981 165 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 CHRNEQ04844 493 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 HSPB2Q16082 182 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 MAPK14Q16539 360 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 NDUFAF6Q330K2 333 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 LRIF1Q5T3J3 769 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 CGB2Q6NT52 195 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 LRRC74BQ6ZQY2 392 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 CHMP1BQ7LBR1 199 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 UBQLNLQ8IYU4 475 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 GTPBP8Q8N3Z3 284 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-215ENST00000601150 TMCO5AQ8N6Q1 288 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 TOR1AIP2Q8NFQ8 470 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 TNIP2Q8NFZ5 429 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 KLHDC3Q9BQ90 382 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 SLC38A1Q9H2H9 487 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 RAD21L1Q9H4I0 556 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 CHST11Q9NPF2 352 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 THUMPD1Q9NXG2 353 aaKnown RBP15.22■□□□□ 0.03
TRIM28-215ENST00000601150 P2RX2Q9UBL9 471 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 L3MBTL1Q9Y468 752 aa15.22■□□□□ 0.03
TRIM28-215ENST00000601150 MBD3L4A6NDZ8 208 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 MBD3L3A6NE82 208 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 MBD3L5A6NJ08 208 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 FAM90A27PA6NNH2 459 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 CLCA1A8K7I4 914 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 CLIC1O00299 241 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 CSTAP01040 98 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 CHRM4P08173 479 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 LINGO3P0C6S8 592 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 GRNP28799 593 aaKnown RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 EIF1P41567 113 aaKnown RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 FGFBP1Q14512 234 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 PAGE3Q5JUK9 113 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 SP5Q6BEB4 398 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 EIF3MQ7L2H7 374 aaKnown RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 ADGRE4PQ86SQ3 457 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 OR5W2Q8NH69 310 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 MBD3L2Q8NHZ7 208 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 SMPDL3BQ92485 455 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 PMM1Q92871 262 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 ARSGQ96EG1 525 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 RNF145Q96MT1 663 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 UCN2Q96RP3 112 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 LAT2Q9GZY6 243 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 MTHFD2LQ9H903 347 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-215ENST00000601150 SLC25A37Q9NYZ2 338 aa15.21■□□□□ 0.03
TRIM28-215ENST00000601150 SLC35A3Q9Y2D2 325 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms