RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SCDO00767 359 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 CDX4O14627 284 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-218ENST00000600383 CNOT3O75175 753 aaKnown RBP13.96□□□□□ -0.17
HIF3A-218ENST00000600383 IL33O95760 270 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 KLK3P07288 261 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-218ENST00000600383 ITIH1P19827 911 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 SLC5A2P31639 672 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 GIPRP48546 466 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 SLC35A2P78381 396 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 GINS1Q14691 196 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 RAB39AQ14964 217 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 CLEC12AQ5QGZ9 265 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 KIF18BQ86Y91 864 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 GRAMD2AQ8IUY3 354 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 PFN4Q8NHR9 129 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 PHOSPHO1Q8TCT1 267 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 C8orf44Q96CB5 159 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 CRB3Q9BUF7 120 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 PLA2G12AQ9BZM1 189 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 DUSP21Q9H596 190 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
HIF3A-218ENST00000600383 TEX51A0A1B0GUA7 166 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 GNB5O14775 395 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 FMO6PO60774 539 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 UTS2O95399 124 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 IL12BP29460 328 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 CLDN6P56747 220 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 DCAF7P61962 342 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 TSPAN31Q12999 210 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 KLHL26Q53HC5 615 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF550Q7Z398 422 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF527Q8NB42 609 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 TOR1AIP2Q8NFQ8 470 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 TMEM239Q8WW34 195 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 MR1Q95460 341 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 CMKLR1Q99788 373 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 IL20RAQ9UHF4 553 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.18
HIF3A-218ENST00000600383 A0A1B0GWA3 101 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 GTPBP1O00178 669 aaKnown RBP13.95□□□□□ -0.18
HIF3A-218ENST00000600383 GALR2O43603 387 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-218ENST00000600383 GMFGO60234 142 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 MAN1A2O60476 641 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 CD59P13987 128 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 GABRB1P18505 474 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 CCR4P51679 360 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 GPR143P51810 404 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 MC2RQ01718 297 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 EMX1Q04741 257 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-218ENST00000600383 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 ALG10BQ5I7T1 473 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 SLX4IPQ5VYV7 408 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 XAF1Q6GPH4 301 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 ACSM5Q6NUN0 579 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 CCDC81Q6ZN84 652 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 C16orf47Q6ZP98 133 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-218ENST00000600383 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-218ENST00000600383 TCEANCQ8N8B7 351 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 B3GNT7Q8NFL0 401 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 TEX47Q8TBZ9 253 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 SPSB2Q99619 263 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 DPH1Q9BZG8 443 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 TRIM2Q9C040 744 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 POLR2J2Q9GZM3 115 aaKnown RBP13.95□□□□□ -0.18
HIF3A-218ENST00000600383 HOXD1Q9GZZ0 328 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 ATP13A2Q9NQ11 1180 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 C20orf141Q9NUB4 165 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 RPS6KB2Q9UBS0 482 aa13.95□□□□□ -0.18
HIF3A-218ENST00000600383 VSTM2BA6NLU5 285 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 CDC42EP2O14613 210 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 RGS10O43665 173 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 ICOSLGO75144 302 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 IFI30P13284 250 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 MAP2K4P45985 399 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 CSNK2BP67870 215 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 RNF4P78317 190 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 SPEM2Q0P670 501 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 PLCXD2Q0VAA5 305 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 CD226Q15762 336 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF613Q6PF04 617 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 PAPD4Q6PIY7 484 aaKnown RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 APOOLQ6UXV4 268 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 BCDIN3DQ7Z5W3 292 aaKnown RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 CMIPQ8IY22 773 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 COPS4Q9BT78 406 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 RBM38Q9H0Z9 239 aaKnown RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 ZBTB20Q9HC78 741 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 KRCC1Q9NPI7 259 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 FBXO8Q9NRD0 319 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 CLN6Q9NWW5 311 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 GPR83Q9NYM4 423 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 GPN3Q9UHW5 284 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 CARD8Q9Y2G2 431 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 A0A0B4J2E0 115 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 A0A1B0GX12 115 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 TLX2O43763 284 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-218ENST00000600383 MPZL2O60487 215 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 FUT1P19526 365 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 ABCD3P28288 659 aa13.94□□□□□ -0.18
HIF3A-218ENST00000600383 C21orf33P30042 268 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms