RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	SYPL1	Q16563	259 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	KRTCAP3	Q53RY4	240 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	HMGN2P46	Q86SG4	172 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	PLCZ1	Q86YW0	608 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	GHDC	Q8N2G8	530 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	PHOSPHO1	Q8TCT1	267 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	NRG4	Q8WWG1	115 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	DNAJC9	Q8WXX5	260 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	SH3YL1	Q96HL8	342 aa	Predicted RBP	18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	BARD1	Q99728	777 aa	Known RBP	18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	CPPED1	Q9BRF8	314 aa	Predicted RBP	18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	THUMPD3	Q9BV44	507 aa	Known RBP	18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	TRIM8	Q9BZR9	551 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	CCM2L	Q9NUG4	571 aa	Predicted RBP	18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	LIPG	Q9Y5X9	500 aa		18.33	■□□□□ 0.53
IRF3-221	ENST00000598808	RELN	P78509	3460 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	FAM220BP	B1ANY3	271 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808		H3BNH8	94 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	ZNHIT1	O43257	154 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	FCMR	O60667	390 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	FCGR1A	P12314	374 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	ABO	P16442	354 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	MTPN	P58546	118 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	SLC10A1	Q14973	349 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	RGN	Q15493	299 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	PDZK1	Q5T2W1	519 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	FNDC7	Q5VTL7	733 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	HEPHL1	Q6MZM0	1159 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	TMCO5A	Q8N6Q1	288 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	OR2T12	Q8NG77	320 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	PRR7	Q8TB68	274 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	DUSP19	Q8WTR2	217 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	DTNBP1	Q96EV8	351 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	TACO1	Q9BSH4	297 aa	Known RBP	18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	ZNF350	Q9GZX5	532 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	SLC6A15	Q9H2J7	730 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	DSN1	Q9H410	356 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	GORASP2	Q9H8Y8	452 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	MED11	Q9P086	117 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	SH3BGRL2	Q9UJC5	107 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	FBXL2	Q9UKC9	423 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	LIPT1	Q9Y234	373 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	HRH3	Q9Y5N1	445 aa		18.33	■□□□□ 0.52
IRF3-221	ENST00000598808	UBR5	O95071	2799 aa	Predicted RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	RP1L1	Q8IWN7	2480 aa	Predicted RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	DHRS12	A0PJE2	317 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	C5orf58	C9J3I9	102 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	HNRNPR	O43390	633 aa	Known RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ACADS	P16219	412 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ATP6V1B2	P21281	511 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ATP12A	P54707	1039 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	GAS1	P54826	345 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	FADD	Q13158	208 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	GCNT6	Q5T4J0	391 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	SWT1	Q5T5J6	900 aa	Known RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	APOOL	Q6UXV4	268 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ZNF619	Q8N2I2	560 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	WDSUB1	Q8N9V3	476 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	OR14L1P	Q8NHC6	308 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ZNF583	Q96ND8	569 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ZNF184	Q99676	751 aa	Predicted RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	RTN4R	Q9BZR6	473 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	KLHL4	Q9C0H6	718 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	KAT8	Q9H7Z6	458 aa	Known RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	ZDHHC11	Q9H8X9	412 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	CACYBP	Q9HB71	228 aa	Known RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	THUMPD1	Q9NXG2	353 aa	Known RBP	18.32	■□□□□ 0.52
IRF3-221	ENST00000598808	OSGIN2	Q9Y236	505 aa		18.32	■□□□□ 0.52
IRF3-221	ENST00000598808		A0A1B0GTH9	108 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	ALG1L2	C9J202	215 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	GTPBP1	O00178	669 aa	Known RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	KIAA0513	O60268	411 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	TNFRSF21	O75509	655 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	CBR3	O75828	277 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	CYP7B1	O75881	506 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	NGFR	P08138	427 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	NUDT7	P0C024	238 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	GGT1	P19440	569 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	MAGEA8	P43361	318 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	ERF	P50548	548 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	MVD	P53602	400 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	CHRNE	Q04844	493 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	C17orf67	Q0P5P2	114 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	CYP51A1	Q16850	503 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	HYAL4	Q2M3T9	481 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	OGFRL1	Q5TC84	451 aa	Predicted RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	TYW3	Q6IPR3	259 aa	Known RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	ERICH5	Q6P6B1	374 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	FRRS1	Q6ZNA5	592 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	SERPINA11	Q86U17	422 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	YRDC	Q86U90	279 aa	Known RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	CALHM3	Q86XJ0	350 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	SPPL2C	Q8IUH8	684 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	MAL2	Q969L2	176 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	REXO5	Q96IC2	774 aa	Known RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	NSMCE2	Q96MF7	247 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	TRNT1	Q96Q11	434 aa	Known RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	QRSL1	Q9H0R6	528 aa	Known RBP	18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	IKZF5	Q9H5V7	419 aa		18.31	■□□□□ 0.52
IRF3-221	ENST00000598808	PTGES2	Q9H7Z7	377 aa		18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms