RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 HCRTR2O43614 444 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 MAN1A2O60476 641 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 OR5F1O95221 314 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 GADD45GO95257 159 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 H1F0P07305 194 aaKnown RBP14.15□□□□□ -0.14
UPF1-206ENST00000598471 FPR1P21462 350 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 DNAJA1P31689 397 aaKnown RBP14.15□□□□□ -0.14
UPF1-206ENST00000598471 GCKP35557 465 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 VHLP40337 213 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 PTDSS1P48651 473 aaKnown RBP14.15□□□□□ -0.14
UPF1-206ENST00000598471 CYB561P49447 251 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 HLCSP50747 726 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 CDH12P55289 794 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 COPZ1P61923 177 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 SNTA1Q13424 505 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 CD226Q15762 336 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 NPTX1Q15818 432 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 COLEC12Q5KU26 742 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 BROXQ5VW32 411 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 TMEM81Q6P7N7 255 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 APOOLQ6UXV4 268 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 TSEN54Q7Z6J9 526 aaKnown RBP14.15□□□□□ -0.14
UPF1-206ENST00000598471 MARCH3Q86UD3 253 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 HIPK1Q86Z02 1210 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 ZDHHC13Q8IUH4 622 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 OFCC1Q8IZS5 231 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 CYP4Z2PQ8N1L4 340 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 BEST3Q8N1M1 668 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 KDF1Q8NAX2 398 aaPredicted RBP14.15□□□□□ -0.14
UPF1-206ENST00000598471 TOR1AIP2Q8NFQ8 470 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 OR5K1Q8NHB7 308 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 PHF10Q8WUB8 498 aaKnown RBP14.15□□□□□ -0.14
UPF1-206ENST00000598471 RNF138Q8WVD3 245 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 EPYCQ99645 322 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 OSBPL11Q9BXB4 747 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 ING2Q9H160 280 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 C8orf4Q9NR00 106 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 STMN3Q9NZ72 180 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 CNIH4Q9P003 139 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 RPS6KB2Q9UBS0 482 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 PRDM4Q9UKN5 801 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 TMCC3Q9ULS5 477 aa14.15□□□□□ -0.14
UPF1-206ENST00000598471 CPSF4LA6NMK7 179 aaKnown RBP14.14□□□□□ -0.15
UPF1-206ENST00000598471 J3KTA2 159 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 EFSO43281 561 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 GKN3PP0CG01 181 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 THRBP10828 461 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 PEX2P28328 305 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 CCR4P51679 360 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 ZNF136P52737 540 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 OC90Q02509 493 aaPredicted RBP14.14□□□□□ -0.15
UPF1-206ENST00000598471 C17orf67Q0P5P2 114 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 ST3GAL3Q11203 375 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 SKP2Q13309 424 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 GANABQ14697 944 aaKnown RBP14.14□□□□□ -0.15
UPF1-206ENST00000598471 DEFB109BQ30KR1 87 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 FGD3Q5JSP0 725 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 ENTPD8Q5MY95 495 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
UPF1-206ENST00000598471 AGAP7PQ5VUJ5 663 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 SLC22A10Q63ZE4 541 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 SLC30A6Q6NXT4 461 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 SHQ1Q6PI26 577 aaKnown RBP14.14□□□□□ -0.15
UPF1-206ENST00000598471 CCDC81Q6ZN84 652 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 ZNF605Q86T29 641 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 PAQR8Q8TEZ7 354 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 NRBF2Q96F24 287 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 AGAP4Q96P64 663 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 WFDC6Q9BQY6 131 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 UTP23Q9BRU9 249 aaKnown RBP14.14□□□□□ -0.15
UPF1-206ENST00000598471 KLHL4Q9C0H6 718 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 ANKRD19PQ9H560 264 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 SELENONQ9NZV5 590 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 ACAD8Q9UKU7 415 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 OAZ3Q9UMX2 235 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 A4GNTQ9UNA3 340 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 CARD8Q9Y2G2 431 aa14.14□□□□□ -0.15
UPF1-206ENST00000598471 TRAPPC13A5PLN9 417 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 G3V2T6 193 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 PEX1O43933 1283 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 BCAS1O75363 584 aaPredicted RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 P04436 131 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 LINGO3P0C6S8 592 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 PRG2P13727 222 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 PGCP20142 388 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 MSX1P28360 303 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 CASP3P42574 277 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 SUMO3P55854 103 aaPredicted RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 HOXC5Q00444 222 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 PLAURQ03405 335 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 ZNF117Q03924 483 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 EPS8Q12929 822 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 PIN1Q13526 163 aaPredicted RBP14.13□□□□□ -0.15
UPF1-206ENST00000598471 CBFBQ13951 182 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 TRAM2Q15035 370 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 OR1Q1Q15612 314 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 LRRC36Q1X8D7 754 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 NDUFAF6Q330K2 333 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 LPCAT4Q643R3 524 aa14.13□□□□□ -0.15
UPF1-206ENST00000598471 ZNF613Q6PF04 617 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms