RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SIRPAP78324 504 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 POU6F2P78424 691 aaPredicted RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 MLC1Q15049 377 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CD226Q15762 336 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 TMEM44Q2T9K0 475 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 WDR75Q8IWA0 830 aaKnown RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CLECL1Q8IZS7 167 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 FNDC9Q8TBE3 224 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 FAM222BQ8WU58 562 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 COQ8BQ96D53 544 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 ZFP3Q96NJ6 502 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 PIGQQ9BRB3 760 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 DUSP26Q9BV47 211 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 BTBD2Q9BX70 525 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 ATAD3AQ9NVI7 634 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 GPATCH2Q9NW75 528 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 DCTN4Q9UJW0 460 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 EIF3LQ9Y262 564 aaKnown RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 SMNDC1O75940 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCAF1-203ENST00000598359 PRPS1L1P21108 318 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 HBA1P69905 142 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 EMX2Q04743 252 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 KRT72Q14CN4 511 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 PON3Q15166 354 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 POU4F3Q15319 338 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 OR4F3Q6IEY1 312 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 PPP4R4Q6NUP7 873 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 CDC73Q6P1J9 531 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 ZCCHC12Q6PEW1 402 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 OLIG3Q7RTU3 272 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 GGNQ86UU5 652 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 CDC20BQ86Y33 519 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 KIF18BQ86Y91 864 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 OR5D16Q8NGK9 328 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 STARD4Q96DR4 205 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 ACTRT3Q9BYD9 372 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 BHLHE41Q9C0J9 482 aaPredicted RBP12.38□□□□□ -0.43
SCAF1-203ENST00000598359 OPN3Q9H1Y3 402 aaPredicted RBP12.38□□□□□ -0.43
SCAF1-203ENST00000598359 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 RASSF4Q9H2L5 321 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 PIGUQ9H490 435 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 TMEM185BQ9H7F4 350 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 UBQLN4Q9NRR5 601 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 DUSP22Q9NRW4 184 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 MED17Q9NVC6 651 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 PNPOQ9NVS9 261 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 PACSIN3Q9UKS6 424 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 RAP2CQ9Y3L5 183 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 MED12LQ86YW9 2145 aa12.38□□□□□ -0.43
SCAF1-203ENST00000598359 FAM221AA4D161 298 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 A8MXE2 369 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 SCDO00767 359 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF195O14628 629 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 TNFRSF21O75509 655 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 NGFRP08138 427 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 T-ENOLP0DO92 83 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 EPXP11678 715 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 HPGDP15428 266 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 DDX5P17844 614 aaKnown RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 IL11P20809 199 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 KIR2DL2P43627 348 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 SLC6A8P48029 635 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 ART1P52961 327 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 IST1P53990 364 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 CASP9P55211 416 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 CLDN8P56748 225 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 LSM12Q3MHD2 195 aaKnown RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 GLYR1Q49A26 553 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 DCST2Q5T1A1 773 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.37□□□□□ -0.438e-10■■■□□ 17.2
SCAF1-203ENST00000598359 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 MTDHQ86UE4 582 aaKnown RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 OR56A1Q8NGH5 318 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 PSMA8Q8TAA3 256 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 POC1BQ8TC44 478 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 PHOSPHO1Q8TCT1 267 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 ADAMTS15Q8TE58 950 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 STACQ99469 402 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 NUF2Q9BZD4 464 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 SERHL2Q9H4I8 314 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 CCM2LQ9NUG4 571 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 NOP53Q9NZM5 478 aaKnown RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 CLEC4AQ9UMR7 237 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 FAF1Q9UNN5 650 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-203ENST00000598359 AP4B1Q9Y6B7 739 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
SCAF1-203ENST00000598359 H0YHG0 523 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 CCDC22O60826 627 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 AQP8O94778 261 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 NQO1P15559 274 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms