RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 SCN2BO60939 215 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 AQP8O94778 261 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 AK1P00568 194 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 HRGP04196 525 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 LBPP18428 481 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 IL11P20809 199 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 MATN1P21941 496 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 DNASE1P24855 282 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 ELK4P28324 431 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 EIF1AXP47813 144 aaKnown RBP16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 ZNF117Q03924 483 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 FAM27E3Q08E93 113 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 PDSS1Q5T2R2 415 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 ANXA8L1Q5VT79 327 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 OR10D3Q8NH80 312 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 OR5AK3PQ8NH89 298 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 MIPOL1Q8TD10 442 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 MBD6Q96DN6 1003 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 PPP1R36Q96LQ0 422 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 SDF2Q99470 211 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 SLC39A3Q9BRY0 314 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 OPN3Q9H1Y3 402 aaPredicted RBP16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 PLEKHF2Q9H8W4 249 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 MEAF6Q9HAF1 191 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 GLRX2Q9NS18 164 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 CCM2LQ9NUG4 571 aaPredicted RBP16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 ICAM5Q9UMF0 924 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 PCDHGB4Q9UN71 923 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 DTNAQ9Y4J8 743 aa16.09■□□□□ 0.17
CHMP2A-203ENST00000597209 TEP1Q99973 2627 aaKnown RBP16.08■□□□□ 0.17
CHMP2A-203ENST00000597209 NUP214P35658 2090 aaPredicted RBP16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 PRSS51A0A1B0GVH4 220 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 CASKO14936 926 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 ANKRD28O15084 1053 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 GUSBP08236 651 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 ME2P23368 584 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 SOAT1P35610 550 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 CPOXP36551 454 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 SIRPAP78324 504 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 DPY19L1Q2PZI1 675 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 FBXW10Q5XX13 1052 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 OGFOD2Q6N063 350 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 CBLN3Q6UW01 205 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 PAMR1Q6UXH9 720 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 CLECL1Q8IZS7 167 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 VPS37AQ8NEZ2 397 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 OR2V1Q8NHB1 315 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 GMPPAQ96IJ6 420 aaPredicted RBP16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 KLHDC3Q9BQ90 382 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 PRRG4Q9BZD6 226 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 NMUR2Q9GZQ4 415 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 PLSCR4Q9NRQ2 329 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 MCTS1Q9ULC4 181 aaKnown RBP16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 PROCRQ9UNN8 238 aa16.08■□□□□ 0.16
CHMP2A-203ENST00000597209 NPIPA5A0A0B4J1W7 369 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 A0A0J9YW62 118 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 NPIPA7E9PJI5 369 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 GTPBP1O00178 669 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 EIF4E2O60573 245 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 SS18L1O75177 396 aaPredicted RBP16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 AGR2O95994 175 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 NPIPA8P0DM63 369 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 POU2F1P14859 743 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 SLC6A8P48029 635 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 CLNS1AP54105 237 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 SLC18A1P54219 525 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 BST1Q10588 318 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 ARHGAP11BQ3KRB8 267 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 HHATQ5VTY9 493 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 AP1ARQ63HQ0 302 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 OR5D16Q8NGK9 328 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 OR6K3Q8NGY3 331 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 GPR119Q8TDV5 335 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 OIT3Q8WWZ8 545 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 ARSGQ96EG1 525 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 SLC35G5Q96KT7 338 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 KLHL15Q96M94 604 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 NUF2Q9BZD4 464 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 SERHL2Q9H4I8 314 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 PNPOQ9NVS9 261 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 CARD8Q9Y2G2 431 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 EMC9Q9Y3B6 208 aa16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 GPC6Q9Y625 555 aaPredicted RBP16.07■□□□□ 0.16
CHMP2A-203ENST00000597209 CELSR1Q9NYQ6 3014 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 RNF103-CHMP3A0A140T963 221 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 TNFSF11O14788 317 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 OIP5O43482 229 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 CXCL13O43927 109 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 STX11O75558 287 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 SYNGR4O95473 234 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 RAF1P04049 648 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 UQCRC2P22695 453 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 UGT2B10P36537 528 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 PHC1P78364 1004 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 FOXF1Q12946 379 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 CASP8Q14790 479 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF141Q15928 474 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 SLC25A53Q5H9E4 307 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms