RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 DOCK7Q96N67 2140 aa16.4■□□□□ 0.22
IRF3-216ENST00000597180 PTPN13Q12923 2485 aa16.4■□□□□ 0.22
IRF3-216ENST00000597180 C7orf72A4D263 438 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 GMNCA6NCL1 334 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 AHRRA9YTQ3 701 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 ZNF264O43296 627 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 GMFGO60234 142 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 EIF4E2O60573 245 aaKnown RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 UBL4AP11441 157 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 TCEA1P23193 301 aaKnown RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 LHX2P50458 406 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 RNF144AP50876 292 aaPredicted RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 P2RX1P51575 399 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 GNGT1P63211 74 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 PLPPR5Q32ZL2 321 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 RUNDC3AQ59EK9 446 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 COQ5Q5HYK3 327 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 C1orf185Q5T7R7 199 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 RAET1LQ5VY80 246 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 CBLN3Q6UW01 205 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 NCCRP1Q6ZVX7 275 aaPredicted RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 RPRMLQ8N4K4 120 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 FAM71CQ8NEG0 241 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 TOR1AIP2Q8NFQ8 470 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 ITLN2Q8WWU7 325 aaPredicted RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 ELAC2Q9BQ52 826 aaKnown RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 KLHDC3Q9BQ90 382 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 PIGQQ9BRB3 760 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 CPPED1Q9BRF8 314 aaPredicted RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 IKZF5Q9H5V7 419 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 MTHFD2LQ9H903 347 aaPredicted RBP16.39■□□□□ 0.21
IRF3-216ENST00000597180 A4GALTQ9NPC4 353 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 MED17Q9NVC6 651 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 CORO2BQ9UQ03 480 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 CARD8Q9Y2G2 431 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 CACNA1CQ13936 2221 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 DSPPQ9NZW4 1301 aa16.39■□□□□ 0.21
IRF3-216ENST00000597180 SPTAN1Q13813 2472 aaKnown RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 OR2M5A3KFT3 312 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 AGAP5A6NIR3 686 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 GTPBP1O00178 669 aaKnown RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 FBP2O00757 339 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 BCHEP06276 602 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 NUDT7P0C024 238 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 ZNF708P17019 499 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 ZNF17P17021 662 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 GPX2P18283 190 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 PGM1P36871 562 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 ZNF41P51814 821 aaPredicted RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 CRISP3P54108 245 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 CLDN18P56856 261 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 SKP2Q13309 424 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 GNA13Q14344 377 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 MAPRE2Q15555 327 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 BCL2A1Q16548 175 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 NDUFAF6Q330K2 333 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 B3GNT6Q6ZMB0 384 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 EIF3MQ7L2H7 374 aaKnown RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 C10orf111Q8N326 155 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 ZNF808Q8N4W9 903 aaPredicted RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 ZBTB8AQ96BR9 441 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 ARSGQ96EG1 525 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 CGREF1Q99674 301 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 TTYH2Q9BSA4 534 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 LAT2Q9GZY6 243 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 QRSL1Q9H0R6 528 aaKnown RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 CAMK2AQ9UQM7 478 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 VDAC3Q9Y277 283 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 SLC35A3Q9Y2D2 325 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 CAPN7Q9Y6W3 813 aa16.38■□□□□ 0.21
IRF3-216ENST00000597180 USP9YO00507 2555 aaPredicted RBP16.38■□□□□ 0.21
IRF3-216ENST00000597180 TMEM247A6NEH6 219 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 BBIP1A8MTZ0 92 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 EVPLLA8MZ36 301 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 FAM47E-STBD1D6RA91 191 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 SNX3O60493 162 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 CCDC22O60826 627 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 DNAJA2O60884 412 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 CSTAP01040 98 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 LINGO3P0C6S8 592 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 GLI4P10075 376 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 PEPDP12955 493 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 AGAP20933 346 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 PSMA4P25789 261 aaKnown RBP16.37■□□□□ 0.21
IRF3-216ENST00000597180 STARP49675 285 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 SMSP52788 366 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 KCNJ10P78508 379 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 NFYCQ13952 458 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 SF3B4Q15427 424 aaKnown RBP eCLIP16.37■□□□□ 0.211e-9■□□□□ 10.1
IRF3-216ENST00000597180 ACSF3Q4G176 576 aaPredicted RBP16.37■□□□□ 0.21
IRF3-216ENST00000597180 PRAMEF8Q5VWM4 474 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 PRAMEF7Q5VXH5 474 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 CMIPQ8IY22 773 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 GTPBP8Q8N3Z3 284 aaPredicted RBP16.37■□□□□ 0.21
IRF3-216ENST00000597180 OR5M1Q8NGP8 315 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 OR5W2Q8NH69 310 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 ZPLD1Q8TCW7 415 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 GPR119Q8TDV5 335 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms