RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZNF844Q08AG5 666 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 RNPS1Q15287 305 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 CCDC153Q494R4 210 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 NCMAPQ5T1S8 102 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 SFRP5Q5T4F7 317 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 ZCCHC12Q6PEW1 402 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 LRIG3Q6UXM1 1119 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 NUFIP2Q7Z417 695 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 TUSC5Q8IXB3 177 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF619Q8N2I2 560 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 ATP6V1C2Q8NEY4 427 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 CLHC1Q8NHS4 586 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 SPATA3Q8NHX4 192 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 ABHD3Q8WU67 409 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 HOXB13Q92826 284 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 GIMAP5Q96F15 307 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 KLHDC3Q9BQ90 382 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 ESRP2Q9H6T0 727 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 TNFRSF12AQ9NP84 129 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 BAIAP2L1Q9UHR4 511 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 CCL27Q9Y4X3 112 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 SNX8Q9Y5X2 465 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 PTGDR2Q9Y5Y4 395 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 PLCE1Q9P212 2302 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 A0A1W2PP18 115 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 A0A1W2PQD3 144 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 GJE1A6NN92 205 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF195O14628 629 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 AZIN1O14977 448 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 TBX19O60806 448 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 GCM2O75603 506 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 PRKD3O94806 890 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 HSPA4LO95757 839 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ADAP00813 363 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 PROCP04070 461 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 LINGO3P0C6S8 592 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 SDC1P18827 310 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ATP6V1C1P21283 382 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 SHC1P29353 583 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 DNAJB13P59910 316 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 RPL38P63173 70 aaKnown RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 DMTNQ08495 405 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 FAPQ12884 760 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 FOXF1Q12946 379 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 TAB1Q15750 504 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 CD226Q15762 336 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF239Q16600 458 aaKnown RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 TMEM176BQ3YBM2 270 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 GALNTL6Q49A17 601 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 HEPHL1Q6MZM0 1159 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ADAM5Q6NVV9 412 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 Q6ZSR9 355 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 FCRLAQ7L513 359 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 IFT20Q8IY31 132 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 CNPY4Q8N129 248 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 BANPQ8N9N5 519 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 LILRB1Q8NHL6 650 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 FBXO27Q8NI29 283 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 RNF128Q8TEB7 428 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 MZB1Q8WU39 189 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 SMAP2Q8WU79 429 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 HSD17B8Q92506 261 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 NEUROG1Q92886 237 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 KISS1RQ969F8 398 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 CCT7Q99832 543 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 BTBD2Q9BX70 525 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 SRXN1Q9BYN0 137 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 REG4Q9BYZ8 158 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ALG2Q9H553 416 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ACSS1Q9NUB1 689 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 ZCCHC3Q9NUD5 404 aaKnown RBP9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 OXSMQ9NWU1 459 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 GIN1Q9NXP7 522 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 NTMQ9P121 344 aa9.4□□□□□ -0.9
CHMP2A-202ENST00000596708 NPIPA5A0A0B4J1W7 369 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 NPIPA7E9PJI5 369 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 NPIPB8E9PQR5 432 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 H3BNH8 94 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 OVOL3O00110 214 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 GTPBP1O00178 669 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 EFNA2O43921 213 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 PLIN3O60664 434 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 SOX30O94993 753 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 CHEK2O96017 543 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 FESP07332 822 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 YES1P07947 543 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 SOD3P08294 240 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 LINC00032P0C843 101 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 NPIPA8P0DM63 369 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 CPA3P15088 417 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 DDX5P17844 614 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ACVR1BP36896 505 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 FRKP42685 505 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ASMTP46597 345 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 P2RX1P51575 399 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF117Q03924 483 aa9.39□□□□□ -0.91
CHMP2A-202ENST00000596708 ITGADQ13349 1161 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms