RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

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Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 H3BML4 177 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 H3BNH8 94 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 ETV2O00321 342 aaPredicted RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 ADAMDEC1O15204 470 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 EIF4E2O60573 245 aaKnown RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 FCMRO60667 390 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 DNAJA2O60884 412 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 STX11O75558 287 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 TNFSF13O75888 250 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 TGDSO95455 350 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 CPSF4O95639 269 aaKnown RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 ADH6P28332 368 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 MRPL19P49406 292 aaKnown RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 PCYT1AP49585 367 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 P2RX1P51575 399 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 TPD52P55327 224 aaPredicted RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 KRTAP10-9P60411 292 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 RAC1P63000 192 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 TXNL4AP83876 142 aaKnown RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 ZNF117Q03924 483 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 OR2A2Q6IF42 318 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 CBLN3Q6UW01 205 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 EPGNQ6UW88 154 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 PLXDC2Q6UX71 529 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 CHMP1BQ7LBR1 199 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 HDXQ7Z353 690 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 GRAMD2AQ8IUY3 354 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 UBQLNLQ8IYU4 475 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 INTS12Q96CB8 462 aaKnown RBP11.75□□□□□ -0.53
USE1-207ENST00000596136 ARSGQ96EG1 525 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 LRRC46Q96FV0 321 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 ADGRG7Q96K78 797 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 OR52B2Q96RD2 323 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 SAP130Q9H0E3 1048 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 PIGMQ9H3S5 423 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 POLE3Q9NRF9 147 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 EXD2Q9NVH0 621 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 ZIM2Q9NZV7 527 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 ABCA4P78363 2273 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 NPIPA5A0A0B4J1W7 369 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 A0A1W2PNV4 684 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 SLC22A20A6NK97 555 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 NPIPA7E9PJI5 369 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 OIP5O43482 229 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 SLC22A3O75751 556 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 UGT2B17O75795 530 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 NTN1O95631 604 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 IL6P05231 212 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 NPIPA8P0DM63 369 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 EIF1P41567 113 aaKnown RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 MAGEA8P43361 318 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 ZNF41P51814 821 aaPredicted RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 AGFG1P52594 562 aaKnown RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 NME5P56597 212 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 RPS3AP61247 264 aaKnown RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 SORDQ00796 357 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 GUSBP1Q15486 140 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 SLC25A53Q5H9E4 307 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 TOR1AIP2Q8NFQ8 470 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 GPR119Q8TDV5 335 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 FIG4Q92562 907 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 SH3YL1Q96HL8 342 aaPredicted RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 OR52E6Q96RD3 313 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 ZBTB18Q99592 522 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 PAQR5Q9NXK6 330 aaPredicted RBP11.74□□□□□ -0.53
USE1-207ENST00000596136 CARD8Q9Y2G2 431 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 USH1CQ9Y6N9 552 aa11.74□□□□□ -0.53
USE1-207ENST00000596136 PRAMEF27A3QJZ7 478 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 SERINC4A6NH21 518 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 CCDC154A6NI56 674 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 A8MXE2 369 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 HMGB1P1B2RPK0 211 aaPredicted RBP11.73□□□□□ -0.53
USE1-207ENST00000596136 C9JVG2 144 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 UBDO15205 165 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 ZNF264O43296 627 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 SEC14L5O43304 696 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 EFNA2O43921 213 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 GMFGO60234 142 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 KIAA0513O60268 411 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 C1QCP02747 245 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 OR12D1P0DN82 309 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 NID1P14543 1247 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 ELK4P28324 431 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 UQCRC1P31930 480 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 CDKN2CP42773 168 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 KIR2DL2P43627 348 aaPredicted RBP11.73□□□□□ -0.53
USE1-207ENST00000596136 KIR2DL3P43628 341 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 FUT5Q11128 374 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 PDZK1Q5T2W1 519 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 ATAD3BQ5T9A4 648 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 NXNQ6DKJ4 435 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 TNFAIP8L2Q6P589 184 aaPredicted RBP11.73□□□□□ -0.53
USE1-207ENST00000596136 MSANTD1Q6ZTZ1 278 aa11.73□□□□□ -0.53
USE1-207ENST00000596136 KIF18BQ86Y91 864 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms