RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 TPD52P55327 224 aaPredicted RBP11.27□□□□□ -0.61
UPF1-203ENST00000594504 CLDN15P56746 228 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 B3GALT5-AS1P59052 145 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 DUSP5Q16690 384 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 CDC73Q6P1J9 531 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 AAGABQ6PD74 315 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 MSANTD1Q6ZTZ1 278 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 COX18Q8N8Q8 333 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 OR5AK3PQ8NH89 298 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 RFWD2Q8NHY2 731 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 FBXO30Q8TB52 745 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 PIK3R3Q92569 461 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 JADE3Q92613 823 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 THOC1Q96FV9 657 aaKnown RBP11.27□□□□□ -0.61
UPF1-203ENST00000594504 C16orf58Q96GQ5 468 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 DACH2Q96NX9 599 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 STACQ99469 402 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 PIGUQ9H490 435 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 DUSP22Q9NRW4 184 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 GPATCH2Q9NW75 528 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 MED11Q9P086 117 aa11.27□□□□□ -0.61
UPF1-203ENST00000594504 A0A0G2JND7 137 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 GXYLT2A0PJZ3 443 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 FAM234BA2RU67 622 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 CASKO14936 926 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 SIAH2O43255 324 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 HCRTR2O43614 444 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
UPF1-203ENST00000594504 FOSL1P15407 271 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 HK1P19367 917 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 UQCRC2P22695 453 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 CHMP24386 653 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 C6orf120Q7Z4R8 191 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 BTLAQ7Z6A9 289 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 TRIML2Q8N7C3 387 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 OR4K17Q8NGC6 315 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 OR9I1Q8NGQ6 314 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 ADAMTS15Q8TE58 950 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 RNF138Q8WVD3 245 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 FIG4Q92562 907 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 STARD4Q96DR4 205 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 CHMP6Q96FZ7 201 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 PANX1Q96RD7 426 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 BTBD2Q9BX70 525 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 OPN3Q9H1Y3 402 aaPredicted RBP11.26□□□□□ -0.61
UPF1-203ENST00000594504 PIGMQ9H3S5 423 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 RMND5AQ9H871 391 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 TMEM45AQ9NWC5 275 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 PPP4R1LQ9P1A2 415 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 ABCG2Q9UNQ0 655 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 TRIM33Q9UPN9 1127 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 MRPS18CQ9Y3D5 142 aaKnown RBP11.26□□□□□ -0.61
UPF1-203ENST00000594504 ZNF337Q9Y3M9 751 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
UPF1-203ENST00000594504 TACC2O95359 2948 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 DUXAA6NLW8 204 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 RFXANKO14593 260 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 GMFGO60234 142 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 KCNK2O95069 426 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 LCN1P31025 176 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 EVI2BP34910 448 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 RFX3P48380 749 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 SIRPAP78324 504 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 POU6F2P78424 691 aaPredicted RBP11.25□□□□□ -0.61
UPF1-203ENST00000594504 NKX6-1P78426 367 aaPredicted RBP11.25□□□□□ -0.61
UPF1-203ENST00000594504 STX5Q13190 355 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 SQLEQ14534 574 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.25□□□□□ -0.61
UPF1-203ENST00000594504 TIGD2Q4W5G0 525 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 METTL21CQ5VZV1 264 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 SAXO2Q658L1 398 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 ZNF474Q6S9Z5 364 aaPredicted RBP11.25□□□□□ -0.61
UPF1-203ENST00000594504 CHMP1BQ7LBR1 199 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 CNEP1R1Q8N9A8 125 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 OR2M3Q8NG83 312 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 FAM110BQ8TC76 370 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 MIPOL1Q8TD10 442 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 NEURL3Q96EH8 262 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 OTUB1Q96FW1 271 aaPredicted RBP11.25□□□□□ -0.61
UPF1-203ENST00000594504 SLC35G5Q96KT7 338 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 RABEP2Q9H5N1 569 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 KLHL28Q9NXS3 571 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 NDRG3Q9UGV2 375 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 PACSIN3Q9UKS6 424 aa11.25□□□□□ -0.61
UPF1-203ENST00000594504 CCDC154A6NI56 674 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 SHISA8B8ZZ34 492 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 SEC14L5O43304 696 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 FADS1O60427 444 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 UTS2O95399 124 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 IGKV1D-16P01601 117 aa11.24□□□□□ -0.61
UPF1-203ENST00000594504 PEPDP12955 493 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms