RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 A0A087WZY1 265 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 GXYLT2A0PJZ3 443 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 TNFSF11O14788 317 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 TM9SF1O15321 606 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 PDPK1O15530 556 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 KLF4O43474 513 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 AKAP10O43572 662 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 NDUFB5O43674 189 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 PLAUP00749 431 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 SERPINE1P05121 402 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 NID1P14543 1247 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 TMEM44Q2T9K0 475 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 VPS26BQ4G0F5 336 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 EXOSC6Q5RKV6 272 aaKnown RBP13.18□□□□□ -0.3
PNKP-202ENST00000593706 C6orf136Q5SQH8 315 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 APOOLQ6UXV4 268 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 GALNT10Q86SR1 603 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 GATSQ8NAP1 163 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 FBXO30Q8TB52 745 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 ZBTB8AQ96BR9 441 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 MTERF3Q96E29 417 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 GIMAP5Q96F15 307 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 PPP3R2Q96LZ3 170 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 TACO1Q9BSH4 297 aaKnown RBP13.18□□□□□ -0.3
PNKP-202ENST00000593706 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
PNKP-202ENST00000593706 TMEM185BQ9H7F4 350 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 HHATLQ9HCP6 504 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 ACSS1Q9NUB1 689 aaPredicted RBP13.18□□□□□ -0.3
PNKP-202ENST00000593706 ATP6V1HQ9UI12 483 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
PNKP-202ENST00000593706 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 TMEM114B3SHH9 223 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 SCAMP2O15127 329 aaKnown RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 CXCL13O43927 109 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 TMCC2O75069 709 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 PEX11AO75192 247 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 IGKV1D-16P01601 117 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 OPN1LWP04000 364 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 HPGDP15428 266 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 PAX1P15863 534 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 ASMTP46597 345 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 VEZF1Q14119 521 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 PTGR1Q14914 329 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 CHI3L2Q15782 390 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.17□□□□□ -0.3
PNKP-202ENST00000593706 HBMQ6B0K9 141 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 CXXC5Q7LFL8 322 aaKnown RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 RIMKLAQ8IXN7 391 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 GTPBP8Q8N3Z3 284 aaPredicted RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 ZNF611Q8N823 705 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 ZFP28Q8NHY6 868 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 SH3YL1Q96HL8 342 aaPredicted RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 RNF145Q96MT1 663 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 SORT1Q99523 831 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 SIRT3Q9NTG7 399 aaPredicted RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 ZNF701Q9NV72 531 aaPredicted RBP13.17□□□□□ -0.3
PNKP-202ENST00000593706 LAMP3Q9UQV4 416 aa13.17□□□□□ -0.3
PNKP-202ENST00000593706 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 SKAP2O75563 359 aaPredicted RBP13.16□□□□□ -0.3
PNKP-202ENST00000593706 PRPS2P11908 318 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 AGTR1P30556 359 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 PRKAG1P54619 331 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 C21orf58P58505 322 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
PNKP-202ENST00000593706 DMTNQ08495 405 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 MLC1Q15049 377 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
PNKP-202ENST00000593706 ATP6AP1LQ52LC2 224 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 PDSS1Q5T2R2 415 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 ZNF781Q8N8C0 355 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 OR2V1Q8NHB1 315 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 PSMA8Q8TAA3 256 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 AKAP1Q92667 903 aaKnown RBP eCLIP13.16□□□□□ -0.3
PNKP-202ENST00000593706 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 ZBED6CLQ96FA7 236 aaPredicted RBP13.16□□□□□ -0.3
PNKP-202ENST00000593706 REXO5Q96IC2 774 aaKnown RBP13.16□□□□□ -0.3
PNKP-202ENST00000593706 ADGRG7Q96K78 797 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 C1orf50Q9BV19 199 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 ASIC5Q9NY37 505 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 ADAM21Q9UKJ8 722 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 GPR52Q9Y2T5 361 aa13.16□□□□□ -0.3
PNKP-202ENST00000593706 YLPM1P49750 1951 aaKnown RBP13.15□□□□□ -0.3
PNKP-202ENST00000593706 A0A1W2PRB8 838 aa13.15□□□□□ -0.3
PNKP-202ENST00000593706 WDR91A4D1P6 747 aa13.15□□□□□ -0.3
PNKP-202ENST00000593706 SCDO00767 359 aa13.15□□□□□ -0.3
PNKP-202ENST00000593706 CLOCKO15516 846 aa13.15□□□□□ -0.3
PNKP-202ENST00000593706 PSMB1P20618 241 aaKnown RBP13.15□□□□□ -0.3
PNKP-202ENST00000593706 IL11P20809 199 aa13.15□□□□□ -0.3
PNKP-202ENST00000593706 MAPK1P28482 360 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms