RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 GPATCH2Q9NW75 528 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 EIF3LQ9Y262 564 aaKnown RBP11.87□□□□□ -0.51
H3F3B-213ENST00000593254 VDAC3Q9Y277 283 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF175Q9Y473 711 aa11.87□□□□□ -0.51
H3F3B-213ENST00000593254 A0A087WZY1 265 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 WDR91A4D1P6 747 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 C7orf72A4D263 438 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 SCDO00767 359 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 SOX30O94993 753 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 SNUPNO95149 360 aaKnown RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 HPGDP15428 266 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 KIR2DL2P43627 348 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 CLDN8P56748 225 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 ABCE1P61221 599 aaKnown RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 RPS3AP61247 264 aaKnown RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 TP53BP2Q13625 1128 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 PON3Q15166 354 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 CD226Q15762 336 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 PDCD2Q16342 344 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 VWA1Q6PCB0 445 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 GGNQ86UU5 652 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 GTPBP8Q8N3Z3 284 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 FNDC9Q8TBE3 224 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 SMPDL3BQ92485 455 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 ZBTB8AQ96BR9 441 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 MOAP1Q96BY2 351 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 CHMP6Q96FZ7 201 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF845Q96IR2 970 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 SORT1Q99523 831 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 DUSP26Q9BV47 211 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 MED17Q9NVC6 651 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-213ENST00000593254 RAP2CQ9Y3L5 183 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 ACTL7BQ9Y614 415 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
H3F3B-213ENST00000593254 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 HRGP04196 525 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 KRT16P08779 473 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 MYZAPP0CAP1 466 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
H3F3B-213ENST00000593254 PCYT1AP49585 367 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 HBA1P69905 142 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 MPP2Q14168 576 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 GUSBP1Q15486 140 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 SPDYE7PQ495Y7 208 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 FBXW10Q5XX13 1052 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 CNEP1R1Q8N9A8 125 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 ADAMTS15Q8TE58 950 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 ADGRG7Q96K78 797 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 NPAS1Q99742 590 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 KLHDC3Q9BQ90 382 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 HAO1Q9UJM8 370 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 FAF1Q9UNN5 650 aaPredicted RBP11.85□□□□□ -0.51
H3F3B-213ENST00000593254 KCNE3Q9Y6H6 103 aa11.85□□□□□ -0.51
H3F3B-213ENST00000593254 CHD3Q12873 2000 aaKnown RBP11.85□□□□□ -0.51
H3F3B-213ENST00000593254 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 INAFM1C9JVW0 142 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 NPIPB9F8W1W9 429 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 H7C1Q1 480 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 CFLARO15519 480 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 ARHGEF9O43307 516 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 SMNDC1O75940 238 aaKnown RBP eCLIP11.84□□□□□ -0.514e-10■■□□□ 11.6
H3F3B-213ENST00000593254 CGAP01215 116 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 TUBBP07437 444 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 FCGR2AP12318 317 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 CPOXP36551 454 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 SLC1A6P48664 564 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 RPL14P50914 215 aaKnown RBP11.84□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF41P51814 821 aaPredicted RBP11.84□□□□□ -0.51
H3F3B-213ENST00000593254 CTU2Q2VPK5 515 aaKnown RBP11.84□□□□□ -0.51
H3F3B-213ENST00000593254 Q5PR19 223 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 BTLAQ7Z6A9 289 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 CROCCP2Q86T23 111 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 KIRREL3Q8IZU9 778 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 ZNF527Q8NB42 609 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 OR8J2Q8NGG1 315 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 OR5AK3PQ8NH89 298 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 PGM2Q96G03 612 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 SH3YL1Q96HL8 342 aaPredicted RBP11.84□□□□□ -0.51
H3F3B-213ENST00000593254 PPP1R36Q96LQ0 422 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 RNF145Q96MT1 663 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 HOXD1Q9GZZ0 328 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 CENPHQ9H3R5 247 aa11.84□□□□□ -0.51
H3F3B-213ENST00000593254 NPIPA5A0A0B4J1W7 369 aa11.83□□□□□ -0.52
H3F3B-213ENST00000593254 NPIPA7E9PJI5 369 aa11.83□□□□□ -0.52
H3F3B-213ENST00000593254 RNASET2O00584 256 aaKnown RBP11.83□□□□□ -0.52
H3F3B-213ENST00000593254 EIF1AYO14602 144 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms