RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TAGLN3Q9UI15 199 aa9.03□□□□□ -0.96
TPM4-216ENST00000592822 ICAM5Q9UMF0 924 aa9.03□□□□□ -0.96
TPM4-216ENST00000592822 USP22Q9UPT9 525 aa9.03□□□□□ -0.96
TPM4-216ENST00000592822 ZNF835Q9Y2P0 537 aa9.03□□□□□ -0.96
TPM4-216ENST00000592822 SLC6A5Q9Y345 797 aa9.03□□□□□ -0.96
TPM4-216ENST00000592822 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
TPM4-216ENST00000592822 GCN1Q92616 2671 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 CCT8L1PA6NM43 557 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 C5orf58C9J3I9 102 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 J3QKU1 62 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 AQP7O14520 342 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ZNF264O43296 627 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 EIF4E2O60573 245 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 HCN1O60741 890 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 GCM2O75603 506 aaPredicted RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 CSTAP01040 98 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 DBIP07108 87 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 ETS2P15036 469 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 TCEA1P23193 301 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 PTGS2P35354 604 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 P2RX1P51575 399 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 B3GALT5-AS1P59052 145 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 KCNJ10P78508 379 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 RBBP4Q09028 425 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ELOAQ14241 798 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 GANABQ14697 944 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 TMEM44Q2T9K0 475 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 EIF2S3LQ2VIR3 472 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 ARHGAP11AQ6P4F7 1023 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ARSKQ6UWY0 536 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ZNF836Q6ZNA1 936 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 EIF3MQ7L2H7 374 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 VRK2Q86Y07 508 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 PEX5LQ8IYB4 626 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 C11orf65Q8NCR3 313 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 OR14L1PQ8NHC6 308 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 WDR60Q8WVS4 1066 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 CNOT9Q92600 299 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 ZNF524Q96C55 264 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ARSGQ96EG1 525 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ZNF583Q96ND8 569 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 HOPXQ9BPY8 73 aaPredicted RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 ECSITQ9BQ95 431 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 SPATA9Q9BWV2 254 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 LAT2Q9GZY6 243 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 LDAHQ9H6V9 325 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 EXO5Q9H790 373 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 PTGES2Q9H7Z7 377 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 GMPR2Q9P2T1 348 aaKnown RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 TNFRSF10DQ9UBN6 386 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 DKKL1Q9UK85 242 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 OSGIN2Q9Y236 505 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 ZNF443Q9Y2A4 671 aaPredicted RBP9.02□□□□□ -0.97
TPM4-216ENST00000592822 CHST2Q9Y4C5 530 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 RELNP78509 3460 aa9.02□□□□□ -0.97
TPM4-216ENST00000592822 HIVEP3Q5T1R4 2406 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 C15orf38-AP3S2A0A0A6YYH1 394 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 CDHR4A6H8M9 788 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 OR14I1A6ND48 311 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 SHISA8B8ZZ34 492 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 NPIPA2E9PIF3 369 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 NPIPA3F8WFD2 350 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 NME4O00746 187 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 SLC19A2O60779 497 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 DNAJA2O60884 412 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 ADAM11O75078 769 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 WISP1O95388 367 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 THBS1P07996 1170 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 UBTFL6P0CB48 400 aaPredicted RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 T-ENOLP0DO92 83 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 NID1P14543 1247 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 IL7RP16871 459 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 BMP7P18075 431 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 HK1P19367 917 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 AQP1P29972 269 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 PCGF2P35227 344 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 SUMO3P55854 103 aaPredicted RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 GFRA1P56159 465 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 PCBP3P57721 371 aaKnown RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 PSME3P61289 254 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 EEF1A1P68104 462 aaKnown RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 CRYZQ08257 329 aaKnown RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 TOMM34Q15785 309 aaPredicted RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 VMACQ2NL98 169 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 PLPPR5Q32ZL2 321 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 GLYR1Q49A26 553 aaPredicted RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 NHSL2Q5HYW2 709 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 EMC4Q5J8M3 183 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 DCST1Q5T197 706 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 MRPL2Q5T653 305 aaKnown RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 VASNQ6EMK4 673 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 Q6ZPB1 254 aaPredicted RBP9.01□□□□□ -0.97
TPM4-216ENST00000592822 ARPINQ7Z6K5 226 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 IFNEQ86WN2 208 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 CMIPQ8IY22 773 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 TMCO5AQ8N6Q1 288 aa9.01□□□□□ -0.97
TPM4-216ENST00000592822 HIPK4Q8NE63 616 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms