RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 C10orf107Q8IVU9 208 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 LILRA2Q8N149 483 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 ZNF611Q8N823 705 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 STEAP2Q8NFT2 490 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 ROBO4Q8WZ75 1007 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 MTERF3Q96E29 417 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 FAM120BQ96EK7 910 aaKnown RBP14.05□□□□□ -0.16
CIRBP-230ENST00000591055 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 REXO5Q96IC2 774 aaKnown RBP14.05□□□□□ -0.16
CIRBP-230ENST00000591055 KLHDC3Q9BQ90 382 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 TACO1Q9BSH4 297 aaKnown RBP14.05□□□□□ -0.16
CIRBP-230ENST00000591055 TMEM204Q9BSN7 226 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 BTBD2Q9BX70 525 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 TUBB1Q9H4B7 451 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 TIGARQ9NQ88 270 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 MID2Q9UJV3 735 aa14.05□□□□□ -0.16
CIRBP-230ENST00000591055 NUP214P35658 2090 aaPredicted RBP14.05□□□□□ -0.16
CIRBP-230ENST00000591055 SMIM23A6NLE4 172 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 KIAA1324LA8MWY0 1029 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 KIF2AO00139 706 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 LSM1O15116 133 aaKnown RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 SHBGP04278 402 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 LINGO3P0C6S8 592 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 FOXF1Q12946 379 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 ZNF239Q16600 458 aaKnown RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 TMEM201Q5SNT2 666 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 GSPT2Q8IYD1 628 aaKnown RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 KIF18AQ8NI77 898 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 PHOSPHO1Q8TCT1 267 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 AKAP1Q92667 903 aaKnown RBP eCLIP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 TRMOQ9BU70 441 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 GATA5Q9BWX5 397 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 HDHD5Q9BXW7 423 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 DUSP22Q9NRW4 184 aa14.04□□□□□ -0.16
CIRBP-230ENST00000591055 ZCCHC3Q9NUD5 404 aaKnown RBP14.04□□□□□ -0.16
CIRBP-230ENST00000591055 CADP27708 2225 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 NUDT14O95848 222 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 HMGN2P05204 90 aaKnown RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 BCKDHAP12694 445 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 KRT4P19013 534 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 ATP6V1C1P21283 382 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 ELK4P28324 431 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 SHC1P29353 583 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 HPCAL1P37235 193 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 ZNF117Q03924 483 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 ZNF844Q08AG5 666 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 LASP1Q14847 261 aaKnown RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 MLC1Q15049 377 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 RNPS1Q15287 305 aaKnown RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 EXOSC6Q5RKV6 272 aaKnown RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 LRIG3Q6UXM1 1119 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 MTERF4Q7Z6M4 381 aaKnown RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 TDRPQ86YL5 185 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 HOMEZQ8IX15 550 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 DDIASQ8IXT1 998 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 C4orf33Q8N1A6 199 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 RNF128Q8TEB7 428 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 ABHD3Q8WU67 409 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 UBLCP1Q8WVY7 318 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 CDS1Q92903 461 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 CPNE4Q96A23 557 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 S100PBPQ96BU1 408 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 STACQ99469 402 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 SRXN1Q9BYN0 137 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 PIGUQ9H490 435 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 PPCSQ9HAB8 311 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 SIRT3Q9NTG7 399 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-230ENST00000591055 GIN1Q9NXP7 522 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 DNAJC15Q9Y5T4 150 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 SNX8Q9Y5X2 465 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
CIRBP-230ENST00000591055 GJE1A6NN92 205 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 H3BNH8 94 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 ZNF195O14628 629 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 EFNA2O43921 213 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 TRIM13O60858 407 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 GCM2O75603 506 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-230ENST00000591055 IL32P24001 234 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 ADH6P28332 368 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 RPS4XP62701 263 aaKnown RBP14.02□□□□□ -0.17
CIRBP-230ENST00000591055 PCLAFQ15004 111 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 TSC22D1Q15714 1073 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 CDC73Q6P1J9 531 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 TFAP2EQ6VUC0 442 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.17
CIRBP-230ENST00000591055 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 GABRG1Q8N1C3 465 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 ZNF527Q8NB42 609 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 LRRN4CLQ8ND94 238 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 FBXO27Q8NI29 283 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 RAB3IL1Q8TBN0 382 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 HOXD1Q9GZZ0 328 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 NGBQ9NPG2 151 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 KLHL13Q9P2N7 655 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 ATP6V1HQ9UI12 483 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 RNF115Q9Y4L5 304 aa14.02□□□□□ -0.17
CIRBP-230ENST00000591055 FBN3Q75N90 2809 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms