RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SGK2Q9HBY8 427 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 NPTNQ9Y639 398 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 CPSF4LA6NMK7 179 aaKnown RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 LRRN3E7EW58 273 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 PRODHO43272 600 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 RFX3P48380 749 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 RNF144AP50876 292 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 RPS13P62277 151 aaKnown RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 CCSMST1Q4G0I0 132 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 CDPF1Q6NVV7 123 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 NDUFAF7Q7L592 441 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 TSPAN33Q86UF1 283 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 SPATA2LQ8IUW3 424 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 KLHL36Q8N4N3 616 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 DERL3Q96Q80 235 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 PDCD10Q9BUL8 212 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 TLNRD1Q9H1K6 362 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 LRRN3Q9H3W5 708 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 MEX3AA1L020 520 aaKnown RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF705EA8MWA4 302 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ADAMTS4O75173 837 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 HLA-FP30511 346 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 GATMP50440 423 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 CCR9P51686 369 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 CACNG1Q06432 222 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ALKBH1Q13686 389 aaKnown RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 FCRLBQ6BAA4 426 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 TMEM99Q8N816 258 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 OR10H4Q8NGA5 316 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 SLC38A5Q8WUX1 472 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 FAM46AQ96IP4 442 aaKnown RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF251Q9BRH9 671 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 PINK1Q9BXM7 581 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 CHRDQ9H2X0 955 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ACSS1Q9NUB1 689 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 FCF1Q9Y324 198 aaKnown RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 PQLC2LA1A4F0 135 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 TUBAL3A6NHL2 446 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 RGS9O75916 674 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 S100A6P06703 90 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 GNSP15586 552 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 TYMPP19971 482 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 PCSK1P29120 753 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 KLF9Q13886 244 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF124Q15973 351 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 AVPI1Q5T686 147 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 H3F3CQ6NXT2 135 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 TMEM71Q6P5X7 295 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 HHIPQ96QV1 700 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 BTBD1Q9H0C5 482 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ABCG4Q9H172 646 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 OR51I1Q9H343 314 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF282Q9UDV7 671 aaPredicted RBP14.17□□□□□ -0.14
CIRBP-228ENST00000590347 ANGPT4Q9Y264 503 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 NTNG1Q9Y2I2 539 aa14.17□□□□□ -0.14
CIRBP-228ENST00000590347 PRKRAO75569 313 aaKnown RBP14.16□□□□□ -0.14
CIRBP-228ENST00000590347 ACP5P13686 325 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 NOS3P29474 1203 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 CCR7P32248 378 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 RAB40BQ12829 278 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 CCINQ13939 588 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 SMCO1Q147U7 214 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 HES5Q5TA89 166 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 SLC36A4Q6YBV0 504 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 NAA40Q86UY6 237 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 OR52N2Q8NGI0 321 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 OR5D16Q8NGK9 328 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 CD99L2Q8TCZ2 262 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 FUBP3Q96I24 572 aaKnown RBP eCLIP14.16□□□□□ -0.14
CIRBP-228ENST00000590347 PAWRQ96IZ0 340 aaKnown RBP14.16□□□□□ -0.14
CIRBP-228ENST00000590347 FNDC11Q9BVV2 318 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 CSNK1G1Q9HCP0 422 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 IL17CQ9P0M4 197 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 K7ERQ8 282 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 TGM6O95932 706 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF8P17098 575 aaPredicted RBP14.16□□□□□ -0.14
CIRBP-228ENST00000590347 FUT1P19526 365 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 RPL3P39023 403 aaKnown RBP14.16□□□□□ -0.14
CIRBP-228ENST00000590347 SGSHP51688 502 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 SREBF2Q12772 1141 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 SKP2Q13309 424 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 NPDC1Q9NQX5 325 aaPredicted RBP14.16□□□□□ -0.14
CIRBP-228ENST00000590347 PCDHB10Q9UN67 800 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 FAM96BQ9Y3D0 163 aa14.16□□□□□ -0.14
CIRBP-228ENST00000590347 ST8SIA5O15466 376 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 CREBL2O60519 120 aaPredicted RBP14.15□□□□□ -0.14
CIRBP-228ENST00000590347 EFCAB14O75071 495 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 SLC25A12O75746 678 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 HIST1H2ABP04908 130 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 ALPPL2P10696 532 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 ADH6P28332 368 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 GPR4P46093 362 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 TAS2R50P59544 299 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 MAT1AQ00266 395 aaKnown RBP14.15□□□□□ -0.14
CIRBP-228ENST00000590347 HSPB3Q12988 150 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 Q3ZCU0 254 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 GPRC6AQ5T6X5 926 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 USP53Q70EK8 1073 aa14.15□□□□□ -0.14
CIRBP-228ENST00000590347 HIST3H2AQ7L7L0 130 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms