RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 UPK1AO00322 258 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PPP6CO00743 305 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PRKD3O94806 890 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 SLU7O95391 586 aaKnown RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 PSMG1O95456 288 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PDYNP01213 254 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 LINGO3P0C6S8 592 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PABPC4LP0CB38 370 aaKnown RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 PTAFRP25105 342 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 CCNG1P51959 295 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 TRA2BP62995 288 aaKnown RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 CHRNEQ04844 493 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 SLC18A2Q05940 514 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 LGALS3BPQ08380 585 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 FOXF1Q12946 379 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 IFT88Q13099 833 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 TMEM176BQ3YBM2 270 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 PDSS1Q5T2R2 415 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 TTC19Q6DKK2 380 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 RINLQ6ZS11 566 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 RAPH1Q70E73 1250 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 TRABD2AQ86V40 505 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 FAM9CQ8IZT9 166 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 RHEBL1Q8TAI7 183 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PIK3R3Q92569 461 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 CPNE4Q96A23 557 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 ZBTB8AQ96BR9 441 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 SH3YL1Q96HL8 342 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 GPR78Q96P69 363 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 ZNF300Q96RE9 604 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 PSD2Q9BQI7 771 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 METTL17Q9H7H0 456 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 ANKZF1Q9H8Y5 726 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 BCO1Q9HAY6 547 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 SLC35C2Q9NQQ7 365 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 C19orf53Q9UNZ5 99 aaPredicted RBP6.97□□□□□ -1.29
VAT1-207ENST00000589828 ATP23Q9Y6H3 246 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PMF1-BGLAPU3KQ54 211 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 TGP01266 2768 aa6.97□□□□□ -1.29
VAT1-207ENST00000589828 PCNX3Q9H6A9 2034 aa6.96□□□□□ -1.29
VAT1-207ENST00000589828 A0A087WV62 115 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 LOC390937A0A1W2PQ73 354 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 TCRBV9S1A1TA0A576 114 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 SYCE1LA8MT33 242 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ZNF195O14628 629 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 OIP5O43482 229 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 COQ9O75208 318 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 RAD51DO75771 328 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 SEC31AO94979 1220 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 STAMBPO95630 424 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ESRRBO95718 433 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 OXSR1O95747 527 aaPredicted RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 ME2P23368 584 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 APOBEC3AP31941 199 aaPredicted RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 GABRA3P34903 492 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ARL1P40616 181 aaPredicted RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 PRIM2P49643 509 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 CLK3P49761 638 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 CDH15P55291 814 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 SLC25A3Q00325 362 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 CHRNB3Q05901 458 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ILF2Q12905 390 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 ACAP2Q15057 778 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 TRADDQ15628 312 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 CD226Q15762 336 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 AWAT1Q58HT5 328 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 TCHHL1Q5QJ38 904 aaPredicted RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 LETMD1Q6P1Q0 360 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 TMEM107Q6UX40 140 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 DEF8Q6ZN54 512 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 PEG10Q86TG7 708 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 P2RY8Q86VZ1 359 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ZBED8Q8IZ13 594 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 PTGR2Q8N8N7 351 aaPredicted RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 CDYL2Q8N8U2 506 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 WDR31Q8NA23 367 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 OR4F6Q8NGB9 312 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ACTRT1Q8TDG2 376 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ACTRT2Q8TDY3 377 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 FAM216AQ8WUB2 273 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 ATP6V1E2Q96A05 226 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 TRIM44Q96DX7 344 aaPredicted RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 FBXO17Q96EF6 278 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 REXO5Q96IC2 774 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 LMF2Q9BU23 707 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 ZNF696Q9H7X3 374 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 Q9N2J8 555 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 CPSF2Q9P2I0 782 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
VAT1-207ENST00000589828 ZNF225Q9UK10 706 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 PCTPQ9UKL6 214 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 PCDHGB1Q9Y5G3 927 aa6.96□□□□□ -1.3
VAT1-207ENST00000589828 NPIPA5A0A0B4J1W7 369 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 A0A1W2PNR3 127 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 HMX2A2RU54 273 aa6.95□□□□□ -1.3
VAT1-207ENST00000589828 MYO1GB0I1T2 1018 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms