RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 ZNF844Q08AG5 666 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 FOXF1Q12946 379 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 PDSS1Q5T2R2 415 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 KANK2Q63ZY3 851 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 GTF2IRD2BQ6EKJ0 949 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 ZCCHC12Q6PEW1 402 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 GTF2IRD2Q86UP8 949 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 TRABD2AQ86V40 505 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 EPS8L3Q8TE67 593 aaKnown RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 UBLCP1Q8WVY7 318 aaPredicted RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 CDS1Q92903 461 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 S100PBPQ96BU1 408 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 TRIM44Q96DX7 344 aaPredicted RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 FAM120BQ96EK7 910 aaKnown RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 GATA5Q9BWX5 397 aaPredicted RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 SIRT3Q9NTG7 399 aaPredicted RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 ZCCHC3Q9NUD5 404 aaKnown RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 ZNF701Q9NV72 531 aaPredicted RBP10.53□□□□□ -0.72
MBD1-218ENST00000589541 GIN1Q9NXP7 522 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 TMED5Q9Y3A6 229 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 DSCAMO60469 2012 aa10.53□□□□□ -0.72
MBD1-218ENST00000589541 RAI1Q7Z5J4 1906 aaPredicted RBP10.52□□□□□ -0.72
MBD1-218ENST00000589541 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 FBN3Q75N90 2809 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 NPIPA5A0A0B4J1W7 369 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 A0A1W2PQD3 144 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 NPIPA7E9PJI5 369 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 OIP5O43482 229 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 TRIM13O60858 407 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 CHRNGP07510 517 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 PABPC4LP0CB38 370 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 NPIPA8P0DM63 369 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 PAX1P15863 534 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 PSMB1P20618 241 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 ATP6V1C1P21283 382 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 HPCAL1P37235 193 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 ASMTP46597 345 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 LASP1Q14847 261 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 PCLAFQ15004 111 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 TSC22D1Q15714 1073 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 ZNF239Q16600 458 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 EXOSC6Q5RKV6 272 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 TMEM201Q5SNT2 666 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 CBLN3Q6UW01 205 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 LRIG3Q6UXM1 1119 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 R3HCC1LQ7Z5L2 792 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 TDRPQ86YL5 185 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 ZNF619Q8N2I2 560 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 ZNF611Q8N823 705 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 ATP6V1C2Q8NEY4 427 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 STEAP2Q8NFT2 490 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 OR7A2PQ8NGA2 310 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 RAB3IL1Q8TBN0 382 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 PHOSPHO1Q8TCT1 267 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 AGR3Q8TD06 166 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 RNF128Q8TEB7 428 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 TWIST2Q8WVJ9 160 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 AKAP1Q92667 903 aaKnown RBP eCLIP10.52□□□□□ -0.73
MBD1-218ENST00000589541 MTERF3Q96E29 417 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 TACO1Q9BSH4 297 aaKnown RBP10.52□□□□□ -0.73
MBD1-218ENST00000589541 TMEM204Q9BSN7 226 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 TRMOQ9BU70 441 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 SRXN1Q9BYN0 137 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 TIGARQ9NQ88 270 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 DUSP22Q9NRW4 184 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 KLHL13Q9P2N7 655 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 GIMAP2Q9UG22 337 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 MID2Q9UJV3 735 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 LAMP3Q9UQV4 416 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 CARD8Q9Y2G2 431 aa10.52□□□□□ -0.73
MBD1-218ENST00000589541 ATRQ13535 2644 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 TMEM114B3SHH9 223 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 KIF2AO00139 706 aaPredicted RBP10.51□□□□□ -0.73
MBD1-218ENST00000589541 ZNF195O14628 629 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 PIP5K1BO14986 540 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 SCAMP2O15127 329 aaKnown RBP10.51□□□□□ -0.73
MBD1-218ENST00000589541 CLOCKO15516 846 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 EFNA2O43921 213 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 GCM2O75603 506 aaPredicted RBP10.51□□□□□ -0.73
MBD1-218ENST00000589541 HSPA4LO95757 839 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 LAMP1P11279 417 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 NID1P14543 1247 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 IL32P24001 234 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 ELK4P28324 431 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 TP53BP2Q13625 1128 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 MLC1Q15049 377 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 RNPS1Q15287 305 aaKnown RBP10.51□□□□□ -0.73
MBD1-218ENST00000589541 NDUFAF6Q330K2 333 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 TMEM176BQ3YBM2 270 aaPredicted RBP10.51□□□□□ -0.73
MBD1-218ENST00000589541 SPDYE7PQ495Y7 208 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 KLHL26Q53HC5 615 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 CDC73Q6P1J9 531 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 TFAP2EQ6VUC0 442 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 RNF165Q6ZSG1 346 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 NUFIP2Q7Z417 695 aaKnown RBP10.51□□□□□ -0.73
MBD1-218ENST00000589541 TUSC5Q8IXB3 177 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 GABRG1Q8N1C3 465 aa10.51□□□□□ -0.73
MBD1-218ENST00000589541 ZNF527Q8NB42 609 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms