RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ZNF136P52737 540 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 EFNB1P98172 346 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 BIKQ13323 160 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 FAM53BQ14153 422 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 GPR68Q15743 365 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 DEFB110Q30KQ9 67 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 PGGHGQ32M88 737 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 TCTE1Q5JU00 501 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 MRPL2Q5T653 305 aaKnown RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 ACSM5Q6NUN0 579 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ZNF613Q6PF04 617 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 IGFN1Q86VF2 1251 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ZNF761Q86XN6 746 aaPredicted RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 NRMQ8IXM6 262 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 SLC34A3Q8N130 599 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CARFQ8N187 725 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 SLC43A2Q8N370 569 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ARL14Q8N4G2 192 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 POGLUT1Q8NBL1 392 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 OR52R1Q8NGF1 315 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 OR52I1Q8NGK6 324 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 OR8D4Q8NGM9 314 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 OR9A4Q8NGU2 314 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 MCFD2Q8NI22 146 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 BRIX1Q8TDN6 353 aaKnown RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 GPR151Q8TDV0 419 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 LMX1AQ8TE12 382 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CHPT1Q8WUD6 406 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 SLC38A3Q99624 504 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 GPA33Q99795 319 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ZNF559Q9BR84 538 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 PLA2G12AQ9BZM1 189 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 RAB33BQ9H082 229 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 DSN1Q9H410 356 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 EGLN3Q9H6Z9 239 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 SIAEQ9HAT2 523 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 FOLH1BQ9HBA9 442 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ZBTB20Q9HC78 741 aaPredicted RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 FAM60AQ9NP50 221 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ISYNA1Q9NPH2 558 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 FAIMQ9NVQ4 179 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CHCHD3Q9NX63 227 aaKnown RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 TAS2R16Q9NYV7 291 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 PLCL2Q9UPR0 1127 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 PMF1-BGLAPU3KQ54 211 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 SNRNP200O75643 2136 aaKnown RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 WDFY3Q8IZQ1 3526 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CABIN1Q9Y6J0 2220 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 TP53BP1Q12888 1972 aaPredicted RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 KNL1Q8NG31 2342 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 MDC1Q14676 2089 aaKnown RBP9.22□□□□□ -0.93
VPS25-202ENST00000589219 ZZEF1O43149 2961 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 LOC100506127A0A0U1RQW1 187 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 SAGE2PA6NJ88 616 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 SLC9B1P1A6NJY1 282 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 J3QRK9 145 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 TAF4O00268 1085 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 KPNA4O00629 521 aaPredicted RBP9.22□□□□□ -0.93
VPS25-202ENST00000589219 CLDN4O14493 209 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 CTNSO60931 367 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 WNT1P04628 370 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 CT62P0C5K7 136 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 CD40LGP29965 261 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 GALNSP34059 522 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 GRK5P34947 590 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 NXPH1P58417 271 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 HNRNPKP61978 463 aaKnown RBP eCLIP9.22□□□□□ -0.93
VPS25-202ENST00000589219 EXOSC7Q15024 291 aaKnown RBP9.22□□□□□ -0.93
VPS25-202ENST00000589219 SPHARQ15513 63 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 ANKDD1AQ495B1 522 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 ARMC4Q5T2S8 1044 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 CCNJQ5T5M9 372 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 DBX2Q6ZNG2 339 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 ZBTB46Q86UZ6 589 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 ATCAYQ86WG3 371 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 GID4Q8IVV7 300 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 NKAIN4Q8IVV8 208 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 SFTPA2Q8IWL1 248 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 CMIPQ8IY22 773 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 NANOGP1Q8N7R0 232 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 C7orf57Q8NEG2 295 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 OR2T33Q8NG76 320 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 OR52L1Q8NGH7 329 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 FANK1Q8TC84 345 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 ZG16BQ96DA0 208 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 RNFT2Q96EX2 444 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 HS6ST2Q96MM7 605 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 DGAT2Q96PD7 388 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 OR5M11Q96RB7 305 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 OR51E2Q9H255 320 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 FN3KQ9H479 309 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 PRTFDC1Q9NRG1 225 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 NDUFB11Q9NX14 153 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 IL20Q9NYY1 176 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 CNIH4Q9P003 139 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 SLC7A7Q9UM01 511 aa9.22□□□□□ -0.93
VPS25-202ENST00000589219 STUB1Q9UNE7 303 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms