RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 FOSL1P15407 271 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 DDX5P17844 614 aaKnown RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 ATP6V1C1P21283 382 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 LOXP28300 417 aaPredicted RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 LCN1P31025 176 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 RPL3P39023 403 aaKnown RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 ZNF117Q03924 483 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 ACKR1Q16570 336 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 NDUFAF6Q330K2 333 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 DCST2Q5T1A1 773 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.83□□□□□ -0.36
VMP1-206ENST00000587945 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 Q71RC1 249 aaPredicted RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 MISPQ8IVT2 679 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 LILRA2Q8N149 483 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 OR6K3Q8NGY3 331 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 OR5AK3PQ8NH89 298 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 ADAMTS15Q8TE58 950 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 OSTF1Q92882 214 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 COQ8BQ96D53 544 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 KLHL15Q96M94 604 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 ACTRT3Q9BYD9 372 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 ZNF395Q9H8N7 513 aaPredicted RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 HHATLQ9HCP6 504 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 FAF1Q9UNN5 650 aaPredicted RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 CARD8Q9Y2G2 431 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 CFLARO15519 480 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 EFNA2O43921 213 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 SMPD2O60906 423 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 LYPLA1O75608 230 aaPredicted RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 NUDT14O95848 222 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 G6PDP11413 515 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 ME2P23368 584 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 CARD18P57730 90 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 RPS26P62854 115 aaKnown RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 TOMM34Q15785 309 aaPredicted RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 KLHL26Q53HC5 615 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 STAC2Q6ZMT1 411 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 ESPNLQ6ZVH7 1005 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 RIMKLAQ8IXN7 391 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 CLEC4FQ8N1N0 589 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 ZNF614Q8N883 585 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 ATP6V1C2Q8NEY4 427 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 OR56A1Q8NGH5 318 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 OR5D16Q8NGK9 328 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 FBXO27Q8NI29 283 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 PSMA8Q8TAA3 256 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 AENQ8WTP8 325 aaKnown RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 ZNF524Q96C55 264 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 PPP1R36Q96LQ0 422 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 SRXN1Q9BYN0 137 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 ROPN1BQ9BZX4 212 aaPredicted RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
VMP1-206ENST00000587945 ROPN1Q9HAT0 212 aaPredicted RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 PAQR5Q9NXK6 330 aaPredicted RBP12.82□□□□□ -0.36
VMP1-206ENST00000587945 WDR91A4D1P6 747 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 ZNF195O14628 629 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 ITM2AO43736 263 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 TYROBPO43914 113 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 NTN1O95631 604 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 HSPA4LO95757 839 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 PRPS1L1P21108 318 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 SOAT1P35610 550 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 SERPINB5P36952 375 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 ETV4P43268 484 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 HBA1P69905 142 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 PGS1Q32NB8 556 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 KRTAP21-3Q3LHN1 58 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 LSM12Q3MHD2 195 aaKnown RBP12.81□□□□□ -0.36
VMP1-206ENST00000587945 Q5PR19 223 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 PDSS1Q5T2R2 415 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 SHEQ5VZ18 495 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 NUDCD3Q8IVD9 361 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 P3H2Q8IVL5 708 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 HOMEZQ8IX15 550 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 ABHD3Q8WU67 409 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 C18orf12Q96KH6 178 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 OR7D2Q96RA2 312 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 PRPF18Q99633 342 aaKnown RBP12.81□□□□□ -0.36
VMP1-206ENST00000587945 CCL19Q99731 98 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 DUSP26Q9BV47 211 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 HOXD1Q9GZZ0 328 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 ATAD3AQ9NVI7 634 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 ICAM5Q9UMF0 924 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 PCNX3Q9H6A9 2034 aa12.81□□□□□ -0.36
VMP1-206ENST00000587945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 GTPBP1O00178 669 aaKnown RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 KLF4O43474 513 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 KRT16P08779 473 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 INHBBP09529 407 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 AGTR1P30556 359 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 ADSLP30566 484 aaPredicted RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 EIF1P41567 113 aaKnown RBP12.8□□□□□ -0.36
VMP1-206ENST00000587945 P2RX1P51575 399 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 ATP12AP54707 1039 aa12.8□□□□□ -0.36
VMP1-206ENST00000587945 PDCD2Q16342 344 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms