RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
DNMT1-213ENST00000587604 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 ABHD3Q8WU67 409 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-213ENST00000587604 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
DNMT1-213ENST00000587604 PPCDCQ96CD2 204 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 KLHDC3Q9BQ90 382 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 REEP4Q9H6H4 257 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 GP6Q9HCN6 339 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 ACSS1Q9NUB1 689 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-213ENST00000587604 C1orf109Q9NX04 203 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 KLHL13Q9P2N7 655 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 GJE1A6NN92 205 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 SLC28A1O00337 649 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 CLOCKO15516 846 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 RIPK2O43353 540 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 RGS14O43566 566 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 TLX2O43763 284 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 PRKD3O94806 890 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 TP53P04637 393 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 FESP07332 822 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 YES1P07947 543 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 ALOX5P09917 674 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 IL32P24001 234 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 ELK4P28324 431 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 SFTPDP35247 375 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 PRIM2P49643 509 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 DNAJB13P59910 316 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 P2RY6Q15077 328 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 TSC22D1Q15714 1073 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 CD226Q15762 336 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF672Q499Z4 452 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 CFAP157Q5JU67 520 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 NUFIP2Q7Z417 695 aaKnown RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 SZRD1Q7Z422 152 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 TUSC5Q8IXB3 177 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 COX18Q8N8Q8 333 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 MNS1Q8NEH6 495 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 MZB1Q8WU39 189 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 C16orf58Q96GQ5 468 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 CCT7Q99832 543 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 TNFRSF12AQ9NP84 129 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 SH3BP4Q9P0V3 963 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 PSMC3IPQ9P2W1 217 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 LIPT1Q9Y234 373 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 CUBNO60494 3623 aa12.5□□□□□ -0.41
DNMT1-213ENST00000587604 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF195O14628 629 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 AKAP10O43572 662 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 EFNA2O43921 213 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 GLRA3O75311 464 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 NTN1O95631 604 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 ADAP00813 363 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 THBS1P07996 1170 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 SHC1P29353 583 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 CDKN1AP38936 164 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 FOXF1Q12946 379 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 ITGADQ13349 1161 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF385BQ569K4 471 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 EXOSC6Q5RKV6 272 aaKnown RBP12.49□□□□□ -0.41
DNMT1-213ENST00000587604 CCNJQ5T5M9 372 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 HMBOX1Q6NT76 420 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 PODNL1Q6PEZ8 512 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 DNM1P46Q6ZS02 220 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 Q6ZSR9 355 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 FCRLAQ7L513 359 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 MTERF4Q7Z6M4 381 aaKnown RBP12.49□□□□□ -0.41
DNMT1-213ENST00000587604 PIWIL2Q8TC59 973 aaKnown RBP12.49□□□□□ -0.41
DNMT1-213ENST00000587604 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 FCRL1Q96LA6 429 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 BTBD2Q9BX70 525 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 SRXN1Q9BYN0 137 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 SLCO5A1Q9H2Y9 848 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 GIN1Q9NXP7 522 aa12.49□□□□□ -0.41
DNMT1-213ENST00000587604 MAGED1Q9Y5V3 778 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-213ENST00000587604 A0A1W2PP18 115 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 DPRXA6NFQ7 191 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF814B7Z6K7 855 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 CD5LO43866 347 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 IFNA2P01563 188 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 PROCP04070 461 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 SDC1P18827 310 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 ACVR1BP36896 505 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 POU6F2P78424 691 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF117Q03924 483 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 PDE7AQ13946 482 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 PGGHGQ32M88 737 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 TMEM176BQ3YBM2 270 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 CCDC153Q494R4 210 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 RFTN2Q52LD8 501 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 CLEC6AQ6EIG7 209 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 TDRPQ86YL5 185 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 HIPK1Q86Z02 1210 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 BANPQ8N9N5 519 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms