RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 P2RX1P51575 399 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 PCBP3P57721 371 aaKnown RBP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 RBPJQ06330 500 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 SKP2Q13309 424 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 VEZF1Q14119 521 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.42■□□□□ 0.387e-7■□□□□ 8.4
DDX39A-204ENST00000586558 GLYR1Q49A26 553 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 RNF220Q5VTB9 566 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 TRILQ7L0X0 811 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 FAM83FQ8NEG4 500 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 OR2T12Q8NG77 320 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 NEIL3Q8TAT5 605 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 SH3YL1Q96HL8 342 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF583Q96ND8 569 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 LAT2Q9GZY6 243 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 EXOSC3Q9NQT5 275 aaKnown RBP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 CMTM6Q9NX76 183 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 TAS2R10Q9NYW0 307 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 ABCD2Q9UBJ2 740 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 ICAM5Q9UMF0 924 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 CARD8Q9Y2G2 431 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 GPC6Q9Y625 555 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 EML6Q6ZMW3 1958 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 RP1L1Q8IWN7 2480 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-204ENST00000586558 PRORSD1PA6NEY8 169 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 ANKUB1A6NFN9 424 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 FAM47E-STBD1D6RA91 191 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 SERPINB7O75635 380 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 PGM1P36871 562 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 EEFSECP57772 596 aaKnown RBP17.41■□□□□ 0.38
DDX39A-204ENST00000586558 ELOAQ14241 798 aaKnown RBP17.41■□□□□ 0.38
DDX39A-204ENST00000586558 C16orf89Q6UX73 402 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 PATL1Q86TB9 770 aaKnown RBP17.41■□□□□ 0.38
DDX39A-204ENST00000586558 PGAM4Q8N0Y7 254 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 OR5W2Q8NH69 310 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 OR14L1PQ8NHC6 308 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 ARSGQ96EG1 525 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 LDAHQ9H6V9 325 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 PRDM4Q9UKN5 801 aa17.41■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF443Q9Y2A4 671 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-204ENST00000586558 SHANK1Q9Y566 2161 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 NINQ8N4C6 2090 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 OR14I1A6ND48 311 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 CCT8L1PA6NM43 557 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 NME4O00746 187 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 AQP7O14520 342 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 OIP5O43482 229 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 WISP2O76076 250 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 PABPC4LP0CB38 370 aaKnown RBP17.4■□□□□ 0.38
DDX39A-204ENST00000586558 UBTFL6P0CB48 400 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-204ENST00000586558 RNF144AP50876 292 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF41P51814 821 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-204ENST00000586558 MXRA7P84157 204 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 LIPEQ05469 1076 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 IGFBP7Q16270 282 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 EIPR1Q53HC9 387 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF311Q5JNZ3 666 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 MRPL2Q5T653 305 aaKnown RBP17.4■□□□□ 0.38
DDX39A-204ENST00000586558 CBLN3Q6UW01 205 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 HMGN2P46Q86SG4 172 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 GRAMD2AQ8IUY3 354 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF440Q8IYI8 595 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 TMCO5AQ8N6Q1 288 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 BHLHE22Q8NFJ8 381 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-204ENST00000586558 SLC6A15Q9H2J7 730 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 PIF1Q9H611 641 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 EXO5Q9H790 373 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 LIPGQ9Y5X9 500 aa17.4■□□□□ 0.38
DDX39A-204ENST00000586558 NBASA2RRP1 2371 aa17.39■□□□□ 0.38
DDX39A-204ENST00000586558 ELOVL7A1L3X0 281 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 C7orf72A4D263 438 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 CDHR4A6H8M9 788 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 ZIC3O60481 467 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 HK1P19367 917 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 AQP1P29972 269 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 PRKAR1BP31321 381 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 SLC6A8P48029 635 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 EEF1A1P68104 462 aaKnown RBP17.39■□□□□ 0.37
DDX39A-204ENST00000586558 CBFBQ13951 182 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 NDUFAF6Q330K2 333 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 SPATS1Q496A3 300 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 NHSL2Q5HYW2 709 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 WIPI1Q5MNZ9 446 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-204ENST00000586558 DHRS4L2Q6PKH6 230 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 ZNF836Q6ZNA1 936 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 CCDC80Q76M96 950 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 YRDCQ86U90 279 aaKnown RBP17.39■□□□□ 0.37
DDX39A-204ENST00000586558 IFNEQ86WN2 208 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 VRK2Q86Y07 508 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 SPPL2CQ8IUH8 684 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 ARMC8Q8IUR7 673 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 CHERPQ8IWX8 916 aaKnown RBP17.39■□□□□ 0.37
DDX39A-204ENST00000586558 MICU2Q8IYU8 434 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 SLC35B4Q969S0 331 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 ZBTB8AQ96BR9 441 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 ALG2Q9H553 416 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 DNAJB12Q9NXW2 375 aaKnown RBP17.39■□□□□ 0.37
DDX39A-204ENST00000586558 TMEM181Q9P2C4 612 aa17.39■□□□□ 0.37
DDX39A-204ENST00000586558 FASNP49327 2511 aaKnown RBP17.39■□□□□ 0.37
DDX39A-204ENST00000586558 A0A1B0GTH9 108 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms