RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 ELAC2Q9BQ52 826 aaKnown RBP16.95■□□□□ 0.3
ATG4D-203ENST00000585752 OR51I1Q9H343 314 aa16.95■□□□□ 0.3
ATG4D-203ENST00000585752 STOML1Q9UBI4 398 aa16.95■□□□□ 0.3
ATG4D-203ENST00000585752 TUBAL3A6NHL2 446 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 CLCA1A8K7I4 914 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 KDM4EB2RXH2 506 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-203ENST00000585752 UTS2O95399 124 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 IL18BPO95998 194 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 LCN1P31025 176 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 MAP3K8P41279 467 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 SEC24CP53992 1094 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 CASP9P55211 416 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 C17orf67Q0P5P2 114 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 MAPRE2Q15555 327 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 FLYWCH1Q4VC44 716 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 TNFAIP8L2Q6P589 184 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-203ENST00000585752 SLC2A7Q6PXP3 512 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 GALNT10Q86SR1 603 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 FUNDC1Q8IVP5 155 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 C9orf106Q8NAJ2 232 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 ZNF527Q8NB42 609 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 FAM222BQ8WU58 562 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 C10orf82Q8WW14 230 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 XAGE5Q8WWM1 108 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 WNT2BQ93097 391 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 RAD21L1Q9H4I0 556 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 MED11Q9P086 117 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 LEF1Q9UJU2 399 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-203ENST00000585752 NDUFAF1Q9Y375 327 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 PDZD2O15018 2839 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 MED12LQ86YW9 2145 aa16.94■□□□□ 0.3
ATG4D-203ENST00000585752 ANKRD17O75179 2603 aaKnown RBP16.93■□□□□ 0.3
ATG4D-203ENST00000585752 PCNX3Q9H6A9 2034 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 FBN2P35556 2912 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 A0A096LPI6 279 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 TMEM247A6NEH6 219 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 LINC01387J3KSC0 135 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 SCDO00767 359 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 CCDC22O60826 627 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 RCBTB2O95199 551 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 ZCCHC18P0CG32 403 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 OR12D1P0DN82 309 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 POU3F2P20265 443 aaPredicted RBP16.93■□□□□ 0.3
ATG4D-203ENST00000585752 LHX2P50458 406 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 GFRA1P56159 465 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATG4D-203ENST00000585752 MMEL1Q495T6 779 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 CCNJQ5T5M9 372 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 RNF130Q86XS8 419 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 UBQLNLQ8IYU4 475 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 PNPT1Q8TCS8 783 aaKnown RBP16.93■□□□□ 0.3
ATG4D-203ENST00000585752 MIPOL1Q8TD10 442 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 DUSP19Q8WTR2 217 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 GTF2H4Q92759 462 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 INTS12Q96CB8 462 aaKnown RBP16.93■□□□□ 0.3
ATG4D-203ENST00000585752 SFXN3Q9BWM7 321 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 CRIM1Q9NZV1 1036 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 MED12Q93074 2177 aa16.93■□□□□ 0.3
ATG4D-203ENST00000585752 A0A1W2PP18 115 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 CRATP43155 626 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 GAS1P54826 345 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 BCL2A1Q16548 175 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 FBXL19-AS1Q494R0 122 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 GPAT3Q53EU6 434 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 OR2A2Q6IF42 318 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 TSPEARQ8WU66 669 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 PIGQQ9BRB3 760 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 RBM24Q9BX46 236 aaKnown RBP16.92■□□□□ 0.3
ATG4D-203ENST00000585752 HOXD1Q9GZZ0 328 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 PIGMQ9H3S5 423 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 ZNF385DQ9H6B1 395 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 TPT1P8Q9HAU6 139 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 UBQLN4Q9NRR5 601 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.92■□□□□ 0.3
ATG4D-203ENST00000585752 CAPN7Q9Y6W3 813 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 MPDZO75970 2070 aa16.92■□□□□ 0.3
ATG4D-203ENST00000585752 FADS1O60427 444 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 ZIC3O60481 467 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 ANGPTL1O95841 491 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 IGKV1D-16P01601 117 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 ZNF708P17019 499 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 PPIBP23284 216 aaKnown RBP16.91■□□□□ 0.3
ATG4D-203ENST00000585752 MAGEA8P43361 318 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 RPS3AP61247 264 aaKnown RBP16.91■□□□□ 0.3
ATG4D-203ENST00000585752 GRAMD1BQ3KR37 738 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 EXOSC6Q5RKV6 272 aaKnown RBP16.91■□□□□ 0.3
ATG4D-203ENST00000585752 LUZP2Q86TE4 346 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 MARCH3Q86UD3 253 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 ZNF614Q8N883 585 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 OR2M3Q8NG83 312 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 FAM110BQ8TC76 370 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 ZFP90Q8TF47 636 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 RAB8BQ92930 207 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 GPATCH1Q9BRR8 931 aaKnown RBP16.91■□□□□ 0.3
ATG4D-203ENST00000585752 CLEC4MQ9H2X3 399 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-203ENST00000585752 PCDHB14Q9Y5E9 798 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 TACC2O95359 2948 aa16.91■□□□□ 0.3
ATG4D-203ENST00000585752 EVPLLA8MZ36 301 aa16.9■□□□□ 0.3
ATG4D-203ENST00000585752 H3BML4 177 aa16.9■□□□□ 0.3
ATG4D-203ENST00000585752 H3BNH8 94 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms